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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   AT5G53800   nucleic acid-binding protein 
 ath-u.5   AT5G53800   nucleic acid-binding protein 
 ath-r.7   AT5G53800   nucleic acid-binding protein 
 ath-m.9   AT5G53800   nucleic acid-binding protein 
 ath-m.4.bio   AT5G53800   nucleic acid-binding protein 
 ath-m.4.hor   AT5G53800   nucleic acid-binding protein 
 ath-m.4.lig   AT5G53800   nucleic acid-binding protein 
 ath-m.4.str   AT5G53800   nucleic acid-binding protein 
 ath-m.4.tis   AT5G53800   nucleic acid-binding protein 
 bra-r.6   103844847   vicilin-like seed storage protein At2g18540 
 bna-r.1   106371277   vicilin-like seed storage protein At2g18540 
 bna-r.1   106418720   vicilin-like seed storage protein At2g18540 
 ghi-r.1   107948645   vicilin-like seed storage protein At2g18540 
 ghi-r.1   121216898   vicilin-like seed storage protein At2g18540 
 cit-r.1   102620193   vicilin-like seed storage protein At2g18540 
 gma-u.5   100808770   vicilin-like seed storage protein At2g18540 
 gma-u.5   100778706   DEAD-box ATP-dependent RNA helicase 42 
 vvi-u.5   100243517   vicilin-like seed storage protein At2g18540 
 ppo-u.5   7460828   uncharacterized LOC7460828 
 mtr-u.5   25487355   DEAD-box ATP-dependent RNA helicase 42 
 sly-u.5   101248648   uncharacterized LOC101248648 
 sot-r.1   102588621   RNA-binding protein 25 
 nta-r.1   107821097   uncharacterized LOC107821097 
 nta-r.1   107791329   uncharacterized LOC107791329 
 osa-u.5   4336481   DEAD-box ATP-dependent RNA helicase 42 
 zma-u.5   100193500   OSJNBa0074L08.19-like protein 
 tae-r.2   123046039   RNA-binding protein 25 
 tae-r.2   123053918   RNA-binding protein 25 
 hvu-r.1   123427324   vicilin-like seed storage protein At2g18540 
 sbi-r.1   110436525   vicilin-like seed storage protein At2g18540 
 bdi-r.1   100835067   vicilin-like seed storage protein At2g18540 
 cre-r.1   CHLRE_03g176050v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G53800 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G53800 (ath-e.2 coexpression data)

CoexMap"835461"


athAT5G53800 | Entrez gene ID : 835461      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 1 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_568799.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_568799.1)
Subcellular
localization
TargetP
other 9  (predict for NP_568799.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
AT5G53800
ath-u.5
for
AT5G53800
ath-r.7
for
AT5G53800
ath-m.9
for
AT5G53800
ath-m.4.bio
for
AT5G53800
ath-m.4.hor
for
AT5G53800
ath-m.4.lig
for
AT5G53800
ath-m.4.str
for
AT5G53800
ath-m.4.tis
for
AT5G53800
bra-r.6
for
103844847
bna-r.1
for
106371277
bna-r.1
for
106418720
ghi-r.1
for
107948645
ghi-r.1
for
121216898
cit-r.1
for
102620193
gma-u.5
for
100808770
gma-u.5
for
100778706
vvi-u.5
for
100243517
ppo-u.5
for
7460828
mtr-u.5
for
25487355
sly-u.5
for
101248648
sot-r.1
for
102588621
nta-r.1
for
107821097
nta-r.1
for
107791329
osa-u.5
for
4336481
zma-u.5
for
100193500
tae-r.2
for
123046039
tae-r.2
for
123053918
hvu-r.1
for
123427324
sbi-r.1
for
110436525
bdi-r.1
for
100835067
cre-r.1
for
CHLRE_03g176050v5


Ortholog ID: 10996
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol AT5G53800 LOC103844847 LOC106371277 LOC106418720 LOC107948645 LOC121216898 LOC102620193 LOC100808770 LOC100778706 LOC100243517 LOC7460828 LOC25487355 LOC101248648 LOC102588621 LOC107821097 LOC107791329 LOC4336481 LOC100193500 LOC123046039 LOC123053918 LOC123427324 LOC110436525 LOC100835067 CHLRE_03g176050v5
Function* nucleic acid-binding protein vicilin-like seed storage protein At2g18540 vicilin-like seed storage protein At2g18540 vicilin-like seed storage protein At2g18540 vicilin-like seed storage protein At2g18540 vicilin-like seed storage protein At2g18540 vicilin-like seed storage protein At2g18540 vicilin-like seed storage protein At2g18540 DEAD-box ATP-dependent RNA helicase 42 vicilin-like seed storage protein At2g18540 uncharacterized LOC7460828 DEAD-box ATP-dependent RNA helicase 42 uncharacterized LOC101248648 RNA-binding protein 25 uncharacterized LOC107821097 uncharacterized LOC107791329 DEAD-box ATP-dependent RNA helicase 42 OSJNBa0074L08.19-like protein RNA-binding protein 25 RNA-binding protein 25 vicilin-like seed storage protein At2g18540 vicilin-like seed storage protein At2g18540 vicilin-like seed storage protein At2g18540 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03250 Viral life cycle - HIV-1 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03250 Viral life cycle - HIV-1 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 6
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 6
cre03015 mRNA surveillance pathway 2
cre03020 RNA polymerase 2
cre03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835461 103844847 106371277 106418720 107948645 121216898 102620193 100808770 100778706 100243517 7460828 25487355 101248648 102588621 107821097 107791329 4336481 100193500 123046039 123053918 123427324 110436525 100835067 5728855
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