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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   MEF9   mitochondrial editing factor 9 
 ath-u.5   MEF9   mitochondrial editing factor 9 
 ath-r.7   MEF9   mitochondrial editing factor 9 
 ath-m.9   MEF9   mitochondrial editing factor 9 
 ath-m.4.bio   MEF9   mitochondrial editing factor 9 
 ath-m.4.hor   MEF9   mitochondrial editing factor 9 
 ath-m.4.lig   MEF9   mitochondrial editing factor 9 
 ath-m.4.str   MEF9   mitochondrial editing factor 9 
 ath-m.4.tis   MEF9   mitochondrial editing factor 9 
 bra-r.6   103838415   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 bna-r.1   106418367   pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like 
 bna-r.1   106412308   pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like 
 ghi-r.1   107945078   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 ghi-r.1   107932383   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 cit-r.1   102619391   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 gma-u.5   100818060   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 gma-u.5   100805139   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 vvi-u.5   100255431   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 mtr-u.5   25493330   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 sly-u.5   101244869   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 sot-r.1   102582433   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 nta-r.1   107826881   pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like 
 nta-r.1   107811253   pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like 
 osa-u.5   107276991   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 tae-r.2   123150321   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 tae-r.2   123165259   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 hvu-r.1   123411778   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 bdi-r.1   100835683   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 

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Top 50 coexpressed genes to MEF9 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MEF9 (ath-e.2 coexpression data)

CoexMap"842523"


athMEF9 | Entrez gene ID : 842523      
Species ath bra bna ghi cit gma vvi mtr sly sot nta osa tae hvu bdi cre sbi ppo zma
Paralog 9 1 2 2 1 2 1 1 1 1 2 1 2 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016554 [list] [network] cytidine to uridine editing  (15 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_176416.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  cyto_mito 1  (predict for NP_176416.1)
Subcellular
localization
TargetP
scret 4,  mito 3  (predict for NP_176416.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
MEF9
ath-u.5
for
MEF9
ath-r.7
for
MEF9
ath-m.9
for
MEF9
ath-m.4.bio
for
MEF9
ath-m.4.hor
for
MEF9
ath-m.4.lig
for
MEF9
ath-m.4.str
for
MEF9
ath-m.4.tis
for
MEF9
bra-r.6
for
103838415
bna-r.1
for
106418367
bna-r.1
for
106412308
ghi-r.1
for
107945078
ghi-r.1
for
107932383
cit-r.1
for
102619391
gma-u.5
for
100818060
gma-u.5
for
100805139
vvi-u.5
for
100255431
mtr-u.5
for
25493330
sly-u.5
for
101244869
sot-r.1
for
102582433
nta-r.1
for
107826881
nta-r.1
for
107811253
osa-u.5
for
107276991
tae-r.2
for
123150321
tae-r.2
for
123165259
hvu-r.1
for
123411778
bdi-r.1
for
100835683


Ortholog ID: 11507
Species ath bra bna bna ghi ghi cit gma gma vvi mtr sly sot nta nta osa tae tae hvu bdi
Symbol MEF9 LOC103838415 LOC106418367 LOC106412308 LOC107945078 LOC107932383 LOC102619391 LOC100818060 LOC100805139 LOC100255431 LOC25493330 LOC101244869 LOC102582433 LOC107826881 LOC107811253 LOC107276991 LOC123150321 LOC123165259 LOC123411778 LOC100835683
Function* mitochondrial editing factor 9 pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
cit00240 Pyrimidine metabolism 2
cit00480 Glutathione metabolism 2
cit01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03013 Nucleocytoplasmic transport 2
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00511 Other glycan degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842523 103838415 106418367 106412308 107945078 107932383 102619391 100818060 100805139 100255431 25493330 101244869 102582433 107826881 107811253 107276991 123150321 123165259 123411778 100835683
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