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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106412308   pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like 
 bna-r.1   106418367   pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like 
 bra-r.6   103838415   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 ath-u.5   MEF9   mitochondrial editing factor 9 
 ghi-r.1   107932383   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 ghi-r.1   107945078   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 cit-r.1   102619391   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 gma-u.5   100818060   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 gma-u.5   100805139   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 vvi-u.5   100255431   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 mtr-u.5   25493330   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 sly-u.5   101244869   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 sot-r.1   102582433   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 nta-r.1   107826881   pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like 
 nta-r.1   107811253   pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like 
 osa-u.5   107276991   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 tae-r.2   123165259   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 tae-r.2   123150321   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 hvu-r.1   123411778   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 
 bdi-r.1   100835683   pentatricopeptide repeat-containing protein At1g62260, mitochondrial 

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Top 50 coexpressed genes to 106412308 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106412308 (bna-r.1 coexpression data)

CoexMap"106412308"


bnaLOC106412308 | Entrez gene ID : 106412308    
Species bna bra ath ghi cit gma vvi mtr sly sot nta osa tae hvu bdi zma cre ppo sbi
Paralog 2 1 1 2 1 2 1 1 1 1 2 1 2 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013708678.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 4  (predict for XP_013708678.1)
Subcellular
localization
TargetP
chlo 7,  mito 6  (predict for XP_013708678.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106412308
bna-r.1
for
106418367
bra-r.6
for
103838415
ath-u.5
for
MEF9
ghi-r.1
for
107932383
ghi-r.1
for
107945078
cit-r.1
for
102619391
gma-u.5
for
100818060
gma-u.5
for
100805139
vvi-u.5
for
100255431
mtr-u.5
for
25493330
sly-u.5
for
101244869
sot-r.1
for
102582433
nta-r.1
for
107826881
nta-r.1
for
107811253
osa-u.5
for
107276991
tae-r.2
for
123165259
tae-r.2
for
123150321
hvu-r.1
for
123411778
bdi-r.1
for
100835683


Ortholog ID: 11507
Species bna bna bra ath ghi ghi cit gma gma vvi mtr sly sot nta nta osa tae tae hvu bdi
Symbol LOC106412308 LOC106418367 LOC103838415 MEF9 LOC107932383 LOC107945078 LOC102619391 LOC100818060 LOC100805139 LOC100255431 LOC25493330 LOC101244869 LOC102582433 LOC107826881 LOC107811253 LOC107276991 LOC123165259 LOC123150321 LOC123411778 LOC100835683
Function* pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like pentatricopeptide repeat-containing protein At1g62260, mitochondrial mitochondrial editing factor 9 pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like pentatricopeptide repeat-containing protein At1g62260, mitochondrial-like pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial pentatricopeptide repeat-containing protein At1g62260, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
cit00240 Pyrimidine metabolism 2
cit00480 Glutathione metabolism 2
cit01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03013 Nucleocytoplasmic transport 2
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00511 Other glycan degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106412308 106418367 103838415 842523 107932383 107945078 102619391 100818060 100805139 100255431 25493330 101244869 102582433 107826881 107811253 107276991 123165259 123150321 123411778 100835683
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