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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G21065   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-r.7   AT4G21065   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-e.2   AT4G21065   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103858682   pentatricopeptide repeat-containing protein At4g21065 
 bna-r.1   106435259   pentatricopeptide repeat-containing protein At3g62890 
 bna-r.1   106438446   pentatricopeptide repeat-containing protein At4g21065 
 bna-r.1   106388255   pentatricopeptide repeat-containing protein At4g21065 
 ghi-r.1   107945217   pentatricopeptide repeat-containing protein At4g21065 
 ghi-r.1   107928638   pentatricopeptide repeat-containing protein At4g21065 
 cit-r.1   102627111   pentatricopeptide repeat-containing protein At4g21065 
 gma-u.5   100789899   pentatricopeptide repeat-containing protein At4g21065 
 vvi-u.5   100854051   pentatricopeptide repeat-containing protein At4g21065 
 mtr-u.5   25486044   pentatricopeptide repeat-containing protein At4g21065 
 sly-u.5   101262032   pentatricopeptide repeat-containing protein At4g21065 
 sot-r.1   102587735   pentatricopeptide repeat-containing protein At4g21065 
 nta-r.1   107775792   pentatricopeptide repeat-containing protein At4g21065-like 
 nta-r.1   107764025   pentatricopeptide repeat-containing protein At4g21065-like 
 osa-u.5   4342406   pentatricopeptide repeat-containing protein At4g21065 
 osa-u.5   4351411   pentatricopeptide repeat-containing protein At4g21065 
 hvu-r.1   123426267   pentatricopeptide repeat-containing protein At4g21065 

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Top 50 coexpressed genes to AT4G21065 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G21065 (ath-u.5 coexpression data)

CoexMap"5008150"


athAT4G21065 | Entrez gene ID : 5008150      
Species ath bra bna ghi cit gma vvi mtr sly sot nta osa hvu sbi tae ppo zma cre bdi
Paralog 3 1 3 2 1 1 1 1 1 1 2 2 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (230 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (391 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1764 genes)  IEA  
Protein NP_001078414.1 [sequence] [blastp]
NP_001078415.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 3,  cyto_nucl 3  (predict for NP_001078414.1)
cyto 7,  chlo 1,  nucl 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for NP_001078415.1)
Subcellular
localization
TargetP
scret 5,  other 4  (predict for NP_001078414.1)
other 5,  scret 5  (predict for NP_001078415.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G21065
ath-r.7
for
AT4G21065
ath-e.2
for
AT4G21065
bra-r.6
for
103858682
bna-r.1
for
106435259
bna-r.1
for
106438446
bna-r.1
for
106388255
ghi-r.1
for
107945217
ghi-r.1
for
107928638
cit-r.1
for
102627111
gma-u.5
for
100789899
vvi-u.5
for
100854051
mtr-u.5
for
25486044
sly-u.5
for
101262032
sot-r.1
for
102587735
nta-r.1
for
107775792
nta-r.1
for
107764025
osa-u.5
for
4342406
osa-u.5
for
4351411
hvu-r.1
for
123426267


Ortholog ID: 10570
Species ath bra bna bna bna ghi ghi cit gma vvi mtr sly sot nta nta osa osa hvu
Symbol AT4G21065 LOC103858682 LOC106435259 LOC106438446 LOC106388255 LOC107945217 LOC107928638 LOC102627111 LOC100789899 LOC100854051 LOC25486044 LOC101262032 LOC102587735 LOC107775792 LOC107764025 LOC4342406 LOC4351411 LOC123426267
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5008150 103858682 106435259 106438446 106388255 107945217 107928638 102627111 100789899 100854051 25486044 101262032 102587735 107775792 107764025 4342406 4351411 123426267
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