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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1  102587735  pentatricopeptide repeat-containing protein At4g21065 
 sly-u.5  101262032  pentatricopeptide repeat-containing protein At4g21065 
 ath-u.5  AT4G21065  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100789899  pentatricopeptide repeat-containing protein At4g21065 
 vvi-u.5  100854051  pentatricopeptide repeat-containing protein At4g21065 
 mtr-u.5  25486044  pentatricopeptide repeat-containing protein At4g21065 
 osa-u.5  4342406  pentatricopeptide repeat-containing protein At4g21065 
 osa-u.5  4351411  pentatricopeptide repeat-containing protein At4g21065 

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Top 50 coexpressed genes to 102587735 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102587735 (sot-r.1 coexpression data)

CoexMap"102587735"


sotLOC102587735 | Entrez gene ID : 102587735
Species sot sly ath gma vvi mtr osa sbi nta bra cre hvu cit bdi ppo zma tae bna ghi
Paralog 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (768 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006355278.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3  (predict for XP_006355278.1)
Subcellular
localization
TargetP
scret 6  (predict for XP_006355278.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sot-r.1
for
102587735

.

sly-u.5
for
101262032

.

ath-u.5
for
AT4G21065

.

gma-u.5
for
100789899

.

vvi-u.5
for
100854051

.

mtr-u.5
for
25486044

.

osa-u.5
for
4342406

.

osa-u.5
for
4351411

.


Ortholog ID: 10570
Species ath gma sly osa osa bra vvi mtr hvu ghi ghi bna bna sot cit nta nta
Symbol AT4G21065 LOC100789899 LOC101262032 LOC4342406 LOC4351411 LOC103858682 LOC100854051 LOC25486044 LOC123426267 LOC107945217 LOC107928638 LOC106388255 LOC106438446 LOC102587735 LOC102627111 LOC107775792 LOC107764025
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At4g21065-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5008150 100789899 101262032 4342406 4351411 103858682 100854051 25486044 123426267 107945217 107928638 106388255 106438446 102587735 102627111 107775792 107764025
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