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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G22370   mediator of RNA polymerase II transcription subunit 
 ath-r.7   AT2G22370   mediator of RNA polymerase II transcription subunit 
 ath-m.9   AT2G22370   mediator of RNA polymerase II transcription subunit 
 ath-e.2   AT2G22370   mediator of RNA polymerase II transcription subunit 
 ath-m.4.bio   AT2G22370   mediator of RNA polymerase II transcription subunit 
 ath-m.4.hor   AT2G22370   mediator of RNA polymerase II transcription subunit 
 ath-m.4.lig   AT2G22370   mediator of RNA polymerase II transcription subunit 
 ath-m.4.str   AT2G22370   mediator of RNA polymerase II transcription subunit 
 ath-m.4.tis   AT2G22370   mediator of RNA polymerase II transcription subunit 
 bra-r.6   103864344   mediator of RNA polymerase II transcription subunit 18 
 bna-r.1   106446408   mediator of RNA polymerase II transcription subunit 18-like 
 bna-r.1   106402747   mediator of RNA polymerase II transcription subunit 18 
 ghi-r.1   107951725   mediator of RNA polymerase II transcription subunit 18 
 ghi-r.1   107950443   mediator of RNA polymerase II transcription subunit 18 
 ghi-r.1   107897272   mediator of RNA polymerase II transcription subunit 18 
 cit-r.1   102619246   mediator of RNA polymerase II transcription subunit 18 
 gma-u.5   100803031   mediator of RNA polymerase II transcription subunit 18-like 
 gma-u.5   100775237   mediator of RNA polymerase II transcription subunit 18 
 gma-u.5   100500095   uncharacterized LOC100500095 
 vvi-u.5   100250557   mediator of RNA polymerase II transcription subunit 18 
 ppo-u.5   7466799   mediator of RNA polymerase II transcription subunit 18 
 mtr-u.5   25488262   mediator of RNA polymerase II transcription subunit 18 
 mtr-u.5   11425921   mediator of RNA polymerase II transcription subunit 18 
 sly-u.5   MED18   mediator of RNA polymerase II transcription subunit 18 
 sot-r.1   102582609   mediator of RNA polymerase II transcription subunit 18-like 
 nta-r.1   107808195   mediator of RNA polymerase II transcription subunit 18 
 nta-r.1   107809350   mediator of RNA polymerase II transcription subunit 18 
 osa-u.5   4328596   mediator of RNA polymerase II transcription subunit 18 
 zma-u.5   100217154   mediator of RNA polymerase II transcription subunit 18 
 tae-r.2   123144254   mediator of RNA polymerase II transcription subunit 18 
 tae-r.2   123136762   mediator of RNA polymerase II transcription subunit 18 
 tae-r.2   123132671   mediator of RNA polymerase II transcription subunit 18 
 hvu-r.1   123404404   mediator of RNA polymerase II transcription subunit 18 
 sbi-r.1   8082887   mediator of RNA polymerase II transcription subunit 18 
 bdi-r.1   112271987   mediator of RNA polymerase II transcription subunit 18 

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Top 50 coexpressed genes to AT2G22370 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G22370 (ath-u.5 coexpression data)

CoexMap"816769"


athAT2G22370 | Entrez gene ID : 816769      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 1 3 1 1 2 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031554 [list] [network] regulation of termination of DNA-templated transcription  (1 genes)  IDA  
GO:0048833 [list] [network] specification of floral organ number  (4 genes)  IMP  
GO:0060261 [list] [network] positive regulation of transcription initiation by RNA polymerase II  (5 genes)  IMP  
GO:0010219 [list] [network] regulation of vernalization response  (6 genes)  IMP  
GO:0048442 [list] [network] sepal development  (8 genes)  IGI  
GO:2000142 [list] [network] regulation of DNA-templated transcription initiation  (15 genes)  IDA  
GO:0032784 [list] [network] regulation of DNA-templated transcription elongation  (16 genes)  IDA  
GO:2000031 [list] [network] regulation of salicylic acid mediated signaling pathway  (23 genes)  IMP  
GO:0048441 [list] [network] petal development  (25 genes)  IGI  
GO:0035196 [list] [network] miRNA processing  (30 genes)  IMP  
GO:1900150 [list] [network] regulation of defense response to fungus  (39 genes)  IMP  
GO:0048510 [list] [network] regulation of timing of transition from vegetative to reproductive phase  (43 genes)  IMP  
GO:0048440 [list] [network] carpel development  (94 genes)  IGI  
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (101 genes)  IMP  
GO:0048443 [list] [network] stamen development  (113 genes)  IGI  
GO:0009723 [list] [network] response to ethylene  (170 genes)  IMP  
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (200 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IMP  
GO CC
GO:0016592 [list] [network] mediator complex  (45 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (77 genes)  IMP  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_565534.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  chlo 1  (predict for NP_565534.1)
Subcellular
localization
TargetP
other 5  (predict for NP_565534.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G22370
ath-r.7
for
AT2G22370
ath-m.9
for
AT2G22370
ath-e.2
for
AT2G22370
ath-m.4.bio
for
AT2G22370
ath-m.4.hor
for
AT2G22370
ath-m.4.lig
for
AT2G22370
ath-m.4.str
for
AT2G22370
ath-m.4.tis
for
AT2G22370
bra-r.6
for
103864344
bna-r.1
for
106446408
bna-r.1
for
106402747
ghi-r.1
for
107951725
ghi-r.1
for
107950443
ghi-r.1
for
107897272
cit-r.1
for
102619246
gma-u.5
for
100803031
gma-u.5
for
100775237
gma-u.5
for
100500095
vvi-u.5
for
100250557
ppo-u.5
for
7466799
mtr-u.5
for
25488262
mtr-u.5
for
11425921
sly-u.5
for
MED18
sot-r.1
for
102582609
nta-r.1
for
107808195
nta-r.1
for
107809350
osa-u.5
for
4328596
zma-u.5
for
100217154
tae-r.2
for
123144254
tae-r.2
for
123136762
tae-r.2
for
123132671
hvu-r.1
for
123404404
sbi-r.1
for
8082887
bdi-r.1
for
112271987


Ortholog ID: 8395
Species ath bra bna bna ghi ghi ghi cit gma gma gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT2G22370 LOC103864344 LOC106446408 LOC106402747 LOC107951725 LOC107950443 LOC107897272 LOC102619246 LOC100803031 LOC100775237 LOC100500095 LOC100250557 LOC7466799 LOC25488262 LOC11425921 MED18 LOC102582609 LOC107808195 LOC107809350 LOC4328596 LOC100217154 LOC123144254 LOC123136762 LOC123132671 LOC123404404 LOC8082887 LOC112271987
Function* mediator of RNA polymerase II transcription subunit mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18-like mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18-like mediator of RNA polymerase II transcription subunit 18 uncharacterized LOC100500095 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18-like mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 8
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 3
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 4
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 3
gma03040 Spliceosome 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 5
ppo04142 Lysosome 4
ppo04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03440 Homologous recombination 2
mtr03460 Fanconi anemia pathway 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 2
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 3
sot00562 Inositol phosphate metabolism 3
sot04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00230 Purine metabolism 2
nta00500 Starch and sucrose metabolism 2
nta04075 Plant hormone signal transduction 2
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00230 Purine metabolism 2
nta00500 Starch and sucrose metabolism 2
nta04075 Plant hormone signal transduction 2
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00220 Arginine biosynthesis 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
tae01240 Biosynthesis of cofactors 2
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03050 Proteasome 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03050 Proteasome 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816769 103864344 106446408 106402747 107951725 107950443 107897272 102619246 100803031 100775237 100500095 100250557 7466799 25488262 11425921 101259544 102582609 107808195 107809350 4328596 100217154 123144254 123136762 123132671 123404404 8082887 112271987
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