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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25488262   mediator of RNA polymerase II transcription subunit 18 
 mtr-r.5   25488262   mediator of RNA polymerase II transcription subunit 18 
 mtr-u.5   11425921   mediator of RNA polymerase II transcription subunit 18 
 gma-u.5   100803031   mediator of RNA polymerase II transcription subunit 18-like 
 gma-u.5   100775237   mediator of RNA polymerase II transcription subunit 18 
 gma-u.5   100500095   uncharacterized LOC100500095 
 ppo-u.5   7466799   mediator of RNA polymerase II transcription subunit 18 
 ath-u.5   AT2G22370   mediator of RNA polymerase II transcription subunit 
 vvi-u.5   100250557   mediator of RNA polymerase II transcription subunit 18 
 sly-u.5   MED18   mediator of RNA polymerase II transcription subunit 18 
 osa-u.5   4328596   mediator of RNA polymerase II transcription subunit 18 
 zma-u.5   100217154   mediator of RNA polymerase II transcription subunit 18 

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Top 50 coexpressed genes to 25488262 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25488262 (mtr-u.5 coexpression data)

CoexMap"25488262"


mtrLOC25488262 | Entrez gene ID : 25488262      
Species mtr gma ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006369 [list] [network] termination of RNA polymerase II transcription  (5 genes)  IEA  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (425 genes)  IEA  
GO CC
GO:0070847 [list] [network] core mediator complex  (9 genes)  IEA  
GO:0016592 [list] [network] mediator complex  (47 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (162 genes)  IEA  
Protein XP_013463393.1 [sequence] [blastp]
XP_039686404.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 2  (predict for XP_013463393.1)
chlo 8,  nucl 1,  cyto 1,  pero 1,  cyto_nucl 1,  cyto_pero 1  (predict for XP_039686404.1)
Subcellular
localization
TargetP
other 7  (predict for XP_013463393.1)
other 8,  mito 3  (predict for XP_039686404.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25488262

.
mtr-r.5
for
25488262

.
mtr-u.5
for
11425921

.
gma-u.5
for
100803031

.
gma-u.5
for
100775237

.
gma-u.5
for
100500095

.
ppo-u.5
for
7466799

.
ath-u.5
for
AT2G22370

.
vvi-u.5
for
100250557

.
sly-u.5
for
MED18

.
osa-u.5
for
4328596

.
zma-u.5
for
100217154

.


Ortholog ID: 8395
Species ath gma gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT2G22370 LOC100775237 LOC100500095 MED18 LOC4328596 LOC100217154 LOC103864344 LOC100250557 LOC7466799 LOC11425921 LOC25488262 LOC123144254 LOC123136762 LOC123404404 LOC107950443 LOC107951725 LOC106446408 LOC106402747 LOC8082887 LOC102582609 LOC102619246 LOC112271987 LOC107809350 LOC107808195
Function* mediator of RNA polymerase II transcription subunit mediator of RNA polymerase II transcription subunit 18 uncharacterized LOC100500095 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18-like mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18-like mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18 mediator of RNA polymerase II transcription subunit 18
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 3
gma03040 Spliceosome 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00220 Arginine biosynthesis 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 5
ppo04142 Lysosome 4
ppo04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 2
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03440 Homologous recombination 2
mtr03460 Fanconi anemia pathway 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
tae01240 Biosynthesis of cofactors 2
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 8
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 3
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03050 Proteasome 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 3
sot00562 Inositol phosphate metabolism 3
sot04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 4
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00230 Purine metabolism 2
nta00500 Starch and sucrose metabolism 2
nta04075 Plant hormone signal transduction 2
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00230 Purine metabolism 2
nta00500 Starch and sucrose metabolism 2
nta04075 Plant hormone signal transduction 2
nta00510 N-Glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816769 100775237 100500095 101259544 4328596 100217154 103864344 100250557 7466799 11425921 25488262 123144254 123136762 123404404 107950443 107951725 106446408 106402747 8082887 102582609 102619246 112271987 107809350 107808195
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