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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-r.7   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.9   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-e.2   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.bio   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.hor   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.lig   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.str   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.tis   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100786208   RNA-binding protein 24-B 
 vvi-u.5   104882246   uncharacterized LOC104882246 
 vvi-u.5   100257521   uncharacterized LOC100257521 
 ppo-u.5   7455359   uncharacterized LOC7455359 
 ppo-u.5   7478798   uncharacterized LOC7478798 
 mtr-u.5   25500626   RNA-binding protein 38 

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Top 50 coexpressed genes to AT2G46780 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G46780 (ath-u.5 coexpression data)

CoexMap"819291"


athAT2G46780 | Entrez gene ID : 819291      
Species ath gma vvi ppo mtr sot hvu tae cit sbi sly zma ghi cre bna nta bdi bra osa
Paralog 9 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  HDA IDA  
Protein NP_001324122.1 [sequence] [blastp]
NP_182201.4 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001324122.1)
nucl 10  (predict for NP_182201.4)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for NP_001324122.1)
other 8,  mito 4  (predict for NP_182201.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT2G46780

.
ath-r.7
for
AT2G46780

.
ath-m.9
for
AT2G46780

.
ath-e.2
for
AT2G46780

.
ath-m.4.bio
for
AT2G46780

.
ath-m.4.hor
for
AT2G46780

.
ath-m.4.lig
for
AT2G46780

.
ath-m.4.str
for
AT2G46780

.
ath-m.4.tis
for
AT2G46780

.
gma-u.5
for
100786208

.
vvi-u.5
for
104882246

.
vvi-u.5
for
100257521

.
ppo-u.5
for
7455359

.
ppo-u.5
for
7478798

.
mtr-u.5
for
25500626

.


Ortholog ID: 11949
Species ath gma bra bra vvi vvi ppo ppo mtr ghi ghi bna bna cit
Symbol AT2G46780 LOC100786208 LOC103866433 LOC103866305 LOC104882246 LOC100257521 LOC7478798 LOC7455359 LOC25500626 LOC107911274 LOC107953004 LOC106450476 LOC125574983 LOC102620234
Function* RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding protein 24-B probable RNA-binding protein ARP1 probable RNA-binding protein ARP1 uncharacterized LOC104882246 uncharacterized LOC100257521 uncharacterized LOC7478798 uncharacterized LOC7455359 RNA-binding protein 38 RNA-binding protein 38 RNA-binding protein 24-B probable RNA-binding protein ARP1 probable RNA-binding protein ARP1 uncharacterized LOC102620234
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 3
vvi00061 Fatty acid biosynthesis 2
vvi00780 Biotin metabolism 2
vvi01212 Fatty acid metabolism 2
vvi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819291 100786208 103866433 103866305 104882246 100257521 7478798 7455359 25500626 107911274 107953004 106450476 125574983 102620234
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