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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G07790   DGCR14-like protein 
 ath-r.7   AT3G07790   DGCR14-like protein 
 ath-m.9   AT3G07790   DGCR14-like protein 
 ath-e.2   AT3G07790   DGCR14-like protein 
 ath-m.4.bio   AT3G07790   DGCR14-like protein 
 ath-m.4.hor   AT3G07790   DGCR14-like protein 
 ath-m.4.lig   AT3G07790   DGCR14-like protein 
 ath-m.4.str   AT3G07790   DGCR14-like protein 
 ath-m.4.tis   AT3G07790   DGCR14-like protein 
 bra-r.6   103870634   splicing factor ESS-2 homolog 
 bra-r.6   103849078   splicing factor ESS-2 homolog 
 bna-r.1   106452872   splicing factor ESS-2 homolog 
 bna-r.1   106427945   splicing factor ESS-2 homolog 
 bna-r.1   125580431   splicing factor ESS-2 homolog 
 ghi-r.1   107912607   splicing factor ESS-2 homolog 
 ghi-r.1   107924533   splicing factor ESS-2 homolog 
 cit-r.1   102613520   uncharacterized LOC102613520 
 gma-u.5   100797750   splicing factor ESS-2 homolog 
 gma-u.5   100787274   splicing factor ESS-2 homolog 
 vvi-u.5   100251152   uncharacterized LOC100251152 
 ppo-u.5   7458261   uncharacterized LOC7458261 
 ppo-u.5   7455988   uncharacterized LOC7455988 
 mtr-u.5   11423041   splicing factor ESS-2 homolog 
 sly-u.5   101251793   uncharacterized LOC101251793 
 sot-r.1   102597282   protein DGCR14 
 nta-r.1   107817685   uncharacterized LOC107817685 
 nta-r.1   107799995   uncharacterized LOC107799995 
 osa-u.5   4341119   uncharacterized LOC4341119 
 zma-u.5   103654975   splicing factor ESS-2 homolog 
 zma-u.5   103654974   splicing factor ESS-2 homolog 
 zma-u.5   103654973   splicing factor ESS-2 homolog 
 tae-r.2   123158152   splicing factor ESS-2 homolog 
 tae-r.2   123165877   splicing factor ESS-2 homolog 
 tae-r.2   123147859   splicing factor ESS-2 homolog 
 hvu-r.1   123410514   splicing factor ESS-2 homolog 
 sbi-r.1   8079180   protein DGCR14 
 bdi-r.1   100841817   splicing factor ESS-2 homolog 
 cre-r.1   CHLRE_11g482050v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G07790 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G07790 (ath-u.5 coexpression data)

CoexMap"819970"


athAT3G07790 | Entrez gene ID : 819970      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 1 2 1 1 1 2 1 3 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (112 genes)  IPI  
GO CC
GO:0005681 [list] [network] spliceosomal complex  (19 genes)  IPI  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_187436.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 2,  mito 2,  cyto_nucl 2,  chlo_mito 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_187436.1)
Subcellular
localization
TargetP
chlo 8,  mito 3  (predict for NP_187436.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G07790
ath-r.7
for
AT3G07790
ath-m.9
for
AT3G07790
ath-e.2
for
AT3G07790
ath-m.4.bio
for
AT3G07790
ath-m.4.hor
for
AT3G07790
ath-m.4.lig
for
AT3G07790
ath-m.4.str
for
AT3G07790
ath-m.4.tis
for
AT3G07790
bra-r.6
for
103870634
bra-r.6
for
103849078
bna-r.1
for
106452872
bna-r.1
for
106427945
bna-r.1
for
125580431
ghi-r.1
for
107912607
ghi-r.1
for
107924533
cit-r.1
for
102613520
gma-u.5
for
100797750
gma-u.5
for
100787274
vvi-u.5
for
100251152
ppo-u.5
for
7458261
ppo-u.5
for
7455988
mtr-u.5
for
11423041
sly-u.5
for
101251793
sot-r.1
for
102597282
nta-r.1
for
107817685
nta-r.1
for
107799995
osa-u.5
for
4341119
zma-u.5
for
103654975
zma-u.5
for
103654974
zma-u.5
for
103654973
tae-r.2
for
123158152
tae-r.2
for
123165877
tae-r.2
for
123147859
hvu-r.1
for
123410514
sbi-r.1
for
8079180
bdi-r.1
for
100841817
cre-r.1
for
CHLRE_11g482050v5


Ortholog ID: 6861
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma zma tae tae tae hvu sbi bdi cre
Symbol AT3G07790 LOC103870634 LOC103849078 LOC106452872 LOC106427945 LOC106401595 LOC107912607 LOC107924533 LOC102613520 LOC100797750 LOC100787274 LOC100251152 LOC7458261 LOC7455988 LOC11423041 LOC101251793 LOC102597282 LOC107817685 LOC107799995 LOC4341119 LOC103654974 LOC103654973 LOC100284478 LOC123158152 LOC123165877 LOC123147859 LOC123410514 LOC8079180 LOC100841817 CHLRE_11g482050v5
Function* DGCR14-like protein splicing factor ESS-2 homolog splicing factor ESS-2 homolog splicing factor ESS-2 homolog splicing factor ESS-2 homolog splicing factor ESS-2 homolog splicing factor ESS-2 homolog splicing factor ESS-2 homolog uncharacterized LOC102613520 splicing factor ESS-2 homolog splicing factor ESS-2 homolog uncharacterized LOC100251152 uncharacterized LOC7458261 uncharacterized LOC7455988 splicing factor ESS-2 homolog uncharacterized LOC101251793 protein DGCR14 uncharacterized LOC107817685 uncharacterized LOC107799995 uncharacterized LOC4341119 splicing factor ESS-2 homolog splicing factor ESS-2 homolog DGCR14 protein splicing factor ESS-2 homolog splicing factor ESS-2 homolog splicing factor ESS-2 homolog splicing factor ESS-2 homolog protein DGCR14 splicing factor ESS-2 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00030 Pentose phosphate pathway 2
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae03272 Virion - Hepatitis viruses 3
tae04144 Endocytosis 3
tae03008 Ribosome biogenesis in eukaryotes 2
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae03272 Virion - Hepatitis viruses 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819970 103870634 103849078 106452872 106427945 106401595 107912607 107924533 102613520 100797750 100787274 100251152 7458261 7455988 11423041 101251793 102597282 107817685 107799995 4341119 103654974 103654973 100284478 123158152 123165877 123147859 123410514 8079180 100841817 66055368
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