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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_11g482050v5   uncharacterized protein 
 ath-u.5   AT3G07790   DGCR14-like protein 
 gma-u.5   100797750   splicing factor ESS-2 homolog 
 gma-u.5   100787274   splicing factor ESS-2 homolog 
 sly-u.5   101251793   uncharacterized LOC101251793 
 osa-u.5   4341119   uncharacterized LOC4341119 
 zma-u.5   103654975   splicing factor ESS-2 homolog 
 zma-u.5   103654974   splicing factor ESS-2 homolog 
 zma-u.5   103654973   splicing factor ESS-2 homolog 
 vvi-u.5   100251152   uncharacterized LOC100251152 
 ppo-u.5   7455988   uncharacterized LOC7455988 
 ppo-u.5   7458261   uncharacterized LOC7458261 
 mtr-u.5   11423041   splicing factor ESS-2 homolog 

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Top 50 coexpressed genes to CHLRE_11g482050v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_11g482050v5 (cre-r.1 coexpression data)

CoexMap"66055368"


creCHLRE_11g482050v5 | Entrez gene ID : 66055368    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 3 1 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (45 genes)  IEA  
GO MF
Protein XP_042919766.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_042919766.1)
Subcellular
localization
TargetP
other 4  (predict for XP_042919766.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_11g482050v5

.
ath-u.5
for
AT3G07790

.
gma-u.5
for
100797750

.
gma-u.5
for
100787274

.
sly-u.5
for
101251793

.
osa-u.5
for
4341119

.
zma-u.5
for
103654975

.
zma-u.5
for
103654974

.
zma-u.5
for
103654973

.
vvi-u.5
for
100251152

.
ppo-u.5
for
7455988

.
ppo-u.5
for
7458261

.
mtr-u.5
for
11423041

.


Ortholog ID: 6861
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G07790 LOC100797750 LOC100787274 LOC101251793 LOC4341119 LOC103654973 LOC100284478 LOC103849078 LOC103870634 LOC100251152 LOC7458261 LOC7455988 LOC11423041 LOC123147859 LOC123158152 LOC123410514 LOC107924533 LOC107912607 LOC106427945 LOC106401595 CHLRE_11g482050v5 LOC8079180 LOC102597282 LOC102613520 LOC100841817 LOC107799995 LOC107817685
Function* DGCR14-like protein splicing factor ESS-2 homolog splicing factor ESS-2 homolog uncharacterized LOC101251793 uncharacterized LOC4341119 splicing factor ESS-2 homolog DGCR14 protein splicing factor ESS-2 homolog splicing factor ESS-2 homolog uncharacterized LOC100251152 uncharacterized LOC7458261 uncharacterized LOC7455988 splicing factor ESS-2 homolog splicing factor ESS-2 homolog splicing factor ESS-2 homolog splicing factor ESS-2 homolog splicing factor ESS-2 homolog splicing factor ESS-2 homolog splicing factor ESS-2 homolog splicing factor ESS-2 homolog uncharacterized protein protein DGCR14 protein DGCR14 uncharacterized LOC102613520 splicing factor ESS-2 homolog uncharacterized LOC107799995 uncharacterized LOC107817685
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00030 Pentose phosphate pathway 2
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae03272 Virion - Hepatitis viruses 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819970 100797750 100787274 101251793 4341119 103654973 100284478 103849078 103870634 100251152 7458261 7455988 11423041 123147859 123158152 123410514 107924533 107912607 106427945 106401595 66055368 8079180 102597282 102613520 100841817 107799995 107817685
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