ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	AT3G11600	E3 ubiquitin-protein ligase
ath-r.7	AT3G11600	E3 ubiquitin-protein ligase
ath-m.9	AT3G11600	E3 ubiquitin-protein ligase
ath-e.2	AT3G11600	E3 ubiquitin-protein ligase
ath-m.4.bio	AT3G11600	E3 ubiquitin-protein ligase
ath-m.4.hor	AT3G11600	E3 ubiquitin-protein ligase
ath-m.4.lig	AT3G11600	E3 ubiquitin-protein ligase
ath-m.4.str	AT3G11600	E3 ubiquitin-protein ligase
ath-m.4.tis	AT3G11600	E3 ubiquitin-protein ligase
ath-u.5	AT5G06270	uncharacterized protein
bra-r.6	103846966	uncharacterized LOC103846966
bra-r.6	103855668	uncharacterized LOC103855668
bna-r.1	111201342	protein GL2-INTERACTING REPRESSOR 1-like
bna-r.1	111215947	protein GL2-INTERACTING REPRESSOR 2-like
bna-r.1	BNAA02G29440D	protein GL2-INTERACTING REPRESSOR 1
ghi-r.1	107891539	protein GL2-INTERACTING REPRESSOR 1
ghi-r.1	107956513	protein GL2-INTERACTING REPRESSOR 2
gma-u.5	102667525	protein GL2-INTERACTING REPRESSOR 1
gma-u.5	100815215	protein GL2-INTERACTING REPRESSOR 1
gma-u.5	100805043	protein GL2-INTERACTING REPRESSOR 1
vvi-u.5	100266492	protein GL2-INTERACTING REPRESSOR 1
mtr-u.5	25499448	protein GL2-INTERACTING REPRESSOR 1
mtr-u.5	25483761	protein GL2-INTERACTING REPRESSOR 1
nta-r.1	142163192	protein GL2-INTERACTING REPRESSOR 1-like
osa-u.5	4335802	protein GL2-INTERACTING REPRESSOR 1
osa-u.5	4329572	protein GL2-INTERACTING REPRESSOR 1
zma-u.5	103627243	uncharacterized LOC103627243
zma-u.5	100278661	uncharacterized LOC100278661
tae-r.2	123041383	protein GL2-INTERACTING REPRESSOR 1
tae-r.2	123053254	protein GL2-INTERACTING REPRESSOR 1
tae-r.2	123093768	protein GL2-INTERACTING REPRESSOR 1
sbi-r.1	8059217	uncharacterized LOC8059217
bdi-r.1	100842870	uncharacterized LOC100842870

Annotation

functional annotation

KEGG

GO BP

GO:0080147 [list] [network] root hair cell development

(110 genes)

IGI

GO CC

GO:0005886 [list] [network] plasma membrane	(2598 genes)	IDA
GO:0005634 [list] [network] nucleus	(10367 genes)	IDA ISM
GO:0005737 [list] [network] cytoplasm	(14000 genes)	IDA

GO MF

GO:0005515 [list] [network] protein binding

(5363 genes)

IPI

Protein

NP_566393.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 3, mito 3

(predict for NP_566393.1)

Subcellular
localization
TargetP

chlo 7, mito 7

(predict for NP_566393.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT3G11600	ath-r.7 for AT3G11600	ath-m.9 for AT3G11600	ath-e.2 for AT3G11600	ath-m.4.bio for AT3G11600	ath-m.4.hor for AT3G11600	ath-m.4.lig for AT3G11600	ath-m.4.str for AT3G11600	ath-m.4.tis for AT3G11600	ath-u.5 for AT5G06270	bra-r.6 for 103846966	bra-r.6 for 103855668	bna-r.1 for 111201342	bna-r.1 for 111215947	bna-r.1 for BNAA02G29440D	ghi-r.1 for 107891539	ghi-r.1 for 107956513	gma-u.5 for 102667525	gma-u.5 for 100815215	gma-u.5 for 100805043	vvi-u.5 for 100266492	mtr-u.5 for 25499448	mtr-u.5 for 25483761	nta-r.1 for 142163192	osa-u.5 for 4335802	osa-u.5 for 4329572	zma-u.5 for 103627243	zma-u.5 for 100278661	tae-r.2 for 123041383	tae-r.2 for 123053254	tae-r.2 for 123093768	sbi-r.1 for 8059217	bdi-r.1 for 100842870

Ortholog

Ortholog ID: 3333

Species

ath

bra

bna

ghi

gma

vvi

mtr

nta

osa

zma

tae

sbi

bdi

Symbol

Function^*

E3 ubiquitin-protein ligase

uncharacterized protein

uncharacterized LOC103846966

uncharacterized LOC103855668

protein GL2-INTERACTING REPRESSOR 2