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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   BRG3   SBP (S-ribonuclease binding protein) family protein 
 ath-r.7   BRG3   SBP (S-ribonuclease binding protein) family protein 
 ath-m.9   BRG3   SBP (S-ribonuclease binding protein) family protein 
 ath-e.2   BRG3   SBP (S-ribonuclease binding protein) family protein 
 ath-m.4.bio   BRG3   SBP (S-ribonuclease binding protein) family protein 
 ath-m.4.hor   BRG3   SBP (S-ribonuclease binding protein) family protein 
 ath-m.4.lig   BRG3   SBP (S-ribonuclease binding protein) family protein 
 ath-m.4.str   BRG3   SBP (S-ribonuclease binding protein) family protein 
 ath-m.4.tis   BRG3   SBP (S-ribonuclease binding protein) family protein 
 ath-u.5   RING   SBP (S-ribonuclease binding protein) family protein 
 ath-u.5   BRG1   SBP (S-ribonuclease binding protein) family protein 
 bra-r.6   103839139   BOI-related E3 ubiquitin-protein ligase 1-like 
 bra-r.6   103870210   probable BOI-related E3 ubiquitin-protein ligase 3 
 bra-r.6   103861061   E3 ubiquitin-protein ligase BOI 
 bna-r.1   106365918   E3 ubiquitin-protein ligase BOI 
 bna-r.1   106437648   E3 ubiquitin-protein ligase BOI-like 
 ghi-r.1   107962275   BOI-related E3 ubiquitin-protein ligase 1 
 ghi-r.1   121220836   E3 ubiquitin-protein ligase BOI 
 ghi-r.1   107941317   probable BOI-related E3 ubiquitin-protein ligase 3 
 cit-r.1   102618190   BOI-related E3 ubiquitin-protein ligase 1 
 cit-r.1   102615723   probable BOI-related E3 ubiquitin-protein ligase 3 
 gma-u.5   100781461   BOI-related E3 ubiquitin-protein ligase 1 
 gma-u.5   100787292   probable BOI-related E3 ubiquitin-protein ligase 3 
 gma-u.5   100791833   BOI-related E3 ubiquitin-protein ligase 1 
 vvi-u.5   100245970   uncharacterized LOC100245970 
 vvi-u.5   100255881   probable BOI-related E3 ubiquitin-protein ligase 3 
 ppo-u.5   18095766   probable BOI-related E3 ubiquitin-protein ligase 3 
 ppo-u.5   7470973   probable BOI-related E3 ubiquitin-protein ligase 3 
 ppo-u.5   18103893   BOI-related E3 ubiquitin-protein ligase 1 
 mtr-u.5   120577745   probable BOI-related E3 ubiquitin-protein ligase 3 
 mtr-u.5   11445076   BOI-related E3 ubiquitin-protein ligase 1 
 mtr-u.5   11416407   probable BOI-related E3 ubiquitin-protein ligase 3 
 sly-u.5   101250858   BOI-related E3 ubiquitin-protein ligase 1 
 sly-u.5   101246293   BOI-related E3 ubiquitin-protein ligase 1 
 sot-r.1   102579240   probable BOI-related E3 ubiquitin-protein ligase 3 
 sot-r.1   102579383   BOI-related E3 ubiquitin-protein ligase 1-like 
 nta-r.1   107808826   BOI-related E3 ubiquitin-protein ligase 1-like 
 nta-r.1   107825090   putative BOI-related E3 ubiquitin-protein ligase 3 
 nta-r.1   107761574   BOI-related E3 ubiquitin-protein ligase 1-like 
 osa-u.5   4333676   BOI-related E3 ubiquitin-protein ligase 1 
 zma-u.5   100279034   uncharacterized LOC100279034 
 zma-u.5   100285989   uncharacterized LOC100285989 
 tae-r.2   123095655   probable BOI-related E3 ubiquitin-protein ligase 3 
 tae-r.2   123090620   probable BOI-related E3 ubiquitin-protein ligase 3 
 hvu-r.1   123450992   E3 ubiquitin-protein ligase BOI-like 
 hvu-r.1   123412998   probable BOI-related E3 ubiquitin-protein ligase 3 
 sbi-r.1   8056736   BOI-related E3 ubiquitin-protein ligase 1 
 bdi-r.1   100837320   probable BOI-related E3 ubiquitin-protein ligase 3 

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Top 50 coexpressed genes to BRG3 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to BRG3 (ath-u.5 coexpression data)

CoexMap"820477"


athBRG3 | Entrez gene ID : 820477      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 3 2 3 2 3 2 3 3 2 2 3 1 2 2 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043067 [list] [network] regulation of programmed cell death  (84 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_566438.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_566438.1)
Subcellular
localization
TargetP
other 7  (predict for NP_566438.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
BRG3
ath-r.7
for
BRG3
ath-m.9
for
BRG3
ath-e.2
for
BRG3
ath-m.4.bio
for
BRG3
ath-m.4.hor
for
BRG3
ath-m.4.lig
for
BRG3
ath-m.4.str
for
BRG3
ath-m.4.tis
for
BRG3
ath-u.5
for
RING
ath-u.5
for
BRG1
bra-r.6
for
103839139
bra-r.6
for
103870210
bra-r.6
for
103861061
bna-r.1
for
106365918
bna-r.1
for
106437648
ghi-r.1
for
107962275
ghi-r.1
for
121220836
ghi-r.1
for
107941317
cit-r.1
for
102618190
cit-r.1
for
102615723
gma-u.5
for
100781461
gma-u.5
for
100787292
gma-u.5
for
100791833
vvi-u.5
for
100245970
vvi-u.5
for
100255881
ppo-u.5
for
18095766
ppo-u.5
for
7470973
ppo-u.5
for
18103893
mtr-u.5
for
120577745
mtr-u.5
for
11445076
mtr-u.5
for
11416407
sly-u.5
for
101250858
sly-u.5
for
101246293
sot-r.1
for
102579240
sot-r.1
for
102579383
nta-r.1
for
107808826
nta-r.1
for
107825090
nta-r.1
for
107761574
osa-u.5
for
4333676
zma-u.5
for
100279034
zma-u.5
for
100285989
tae-r.2
for
123095655
tae-r.2
for
123090620
hvu-r.1
for
123450992
hvu-r.1
for
123412998
sbi-r.1
for
8056736
bdi-r.1
for
100837320


Ortholog ID: 848
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa zma zma tae tae hvu hvu sbi bdi
Symbol RING BRG2 LOC103870210 LOC103859478 LOC103848472 LOC106437648 LOC106377491 LOC111199241 LOC107948583 LOC107932689 LOC107891747 LOC102618190 LOC102615723 LOC100787292 LOC100791833 LOC100797512 LOC100245970 LOC100255881 LOC7470973 LOC18103893 LOC7457634 LOC11445076 LOC11416407 LOC11414404 LOC101250858 LOC101246293 LOC102579240 LOC102579383 LOC107808826 LOC107761574 LOC107779863 LOC4333676 LOC100279034 LOC100285989 LOC123075350 LOC123166721 LOC123412998 LOC123412999 LOC8056736 LOC100837320
Function* SBP (S-ribonuclease binding protein) family protein zinc ion binding protein probable BOI-related E3 ubiquitin-protein ligase 3 probable BOI-related E3 ubiquitin-protein ligase 3 BOI-related E3 ubiquitin-protein ligase 1 E3 ubiquitin-protein ligase BOI-like probable BOI-related E3 ubiquitin-protein ligase 3 probable BOI-related E3 ubiquitin-protein ligase 3 probable BOI-related E3 ubiquitin-protein ligase 3 probable BOI-related E3 ubiquitin-protein ligase 3 E3 ubiquitin-protein ligase BOI BOI-related E3 ubiquitin-protein ligase 1 probable BOI-related E3 ubiquitin-protein ligase 3 probable BOI-related E3 ubiquitin-protein ligase 3 BOI-related E3 ubiquitin-protein ligase 1 BOI-related E3 ubiquitin-protein ligase 1 uncharacterized LOC100245970 probable BOI-related E3 ubiquitin-protein ligase 3 probable BOI-related E3 ubiquitin-protein ligase 3 BOI-related E3 ubiquitin-protein ligase 1 BOI-related E3 ubiquitin-protein ligase 1 BOI-related E3 ubiquitin-protein ligase 1 probable BOI-related E3 ubiquitin-protein ligase 3 E3 ubiquitin-protein ligase BOI BOI-related E3 ubiquitin-protein ligase 1 BOI-related E3 ubiquitin-protein ligase 1 probable BOI-related E3 ubiquitin-protein ligase 3 BOI-related E3 ubiquitin-protein ligase 1-like BOI-related E3 ubiquitin-protein ligase 1-like BOI-related E3 ubiquitin-protein ligase 1-like putative BOI-related E3 ubiquitin-protein ligase 3 BOI-related E3 ubiquitin-protein ligase 1 uncharacterized LOC100279034 uncharacterized LOC100285989 probable BOI-related E3 ubiquitin-protein ligase 3 E3 ubiquitin-protein ligase BOI probable BOI-related E3 ubiquitin-protein ligase 3 probable BOI-related E3 ubiquitin-protein ligase 3 BOI-related E3 ubiquitin-protein ligase 1 probable BOI-related E3 ubiquitin-protein ligase 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 6
ath00941 Flavonoid biosynthesis 4
ath00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 3
ppo04148 Efferocytosis 2
ppo04517 IgSF CAM signaling 2
ppo04518 Integrin signaling 2
ppo04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 5
bdi01200 Carbon metabolism 5
bdi04146 Peroxisome 3
bdi00250 Alanine, aspartate and glutamate metabolism 2
bdi00260 Glycine, serine and threonine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827714 844252 103870210 103859478 103848472 106437648 106377491 111199241 107948583 107932689 107891747 102618190 102615723 100787292 100791833 100797512 100245970 100255881 7470973 18103893 7457634 11445076 11416407 11414404 101250858 101246293 102579240 102579383 107808826 107761574 107779863 4333676 100279034 100285989 123075350 123166721 123412998 123412999 8056736 100837320
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