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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-r.7   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-m.9   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-e.2   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-m.4.bio   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-m.4.hor   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-m.4.lig   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-m.4.str   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-m.4.tis   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 gma-u.5   100781573   uncharacterized exonuclease domain-containing protein At3g15140 
 vvi-u.5   100248650   uncharacterized exonuclease domain-containing protein At3g15140 
 ppo-u.5   7470965   uncharacterized exonuclease domain-containing protein At3g15140 
 mtr-u.5   11426353   uncharacterized exonuclease domain-containing protein At3g15140 
 sly-u.5   101262330   uncharacterized exonuclease domain-containing protein At3g15140 
 osa-u.5   9267223   uncharacterized exonuclease domain-containing protein At3g15140 
 zma-u.5   100193112   uncharacterized LOC100193112 

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Top 50 coexpressed genes to AT3G15140 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G15140 (ath-u.5 coexpression data)

CoexMap"820745"


athAT3G15140 | Entrez gene ID : 820745      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 9 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0035194 [list] [network] regulatory ncRNA-mediated post-transcriptional gene silencing  (93 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity  (13 genes)  IEA  
GO:0016891 [list] [network] RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism  (61 genes)  IMP  
GO:0003676 [list] [network] nucleic acid binding  (3104 genes)  IEA  
Protein NP_001327308.1 [sequence] [blastp]
NP_566502.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 1,  nucl 1,  extr 1,  cyto 1,  E.R. 1,  pero 1,  cysk_nucl 1,  nucl_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001327308.1)
chlo 4,  mito 3,  vacu 1,  cyto_mito 1  (predict for NP_566502.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for NP_001327308.1)
chlo 7,  mito 4  (predict for NP_566502.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G15140

.
ath-r.7
for
AT3G15140

.
ath-m.9
for
AT3G15140

.
ath-e.2
for
AT3G15140

.
ath-m.4.bio
for
AT3G15140

.
ath-m.4.hor
for
AT3G15140

.
ath-m.4.lig
for
AT3G15140

.
ath-m.4.str
for
AT3G15140

.
ath-m.4.tis
for
AT3G15140

.
gma-u.5
for
100781573

.
vvi-u.5
for
100248650

.
ppo-u.5
for
7470965

.
mtr-u.5
for
11426353

.
sly-u.5
for
101262330

.
osa-u.5
for
9267223

.
zma-u.5
for
100193112

.


Ortholog ID: 11678
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G15140 LOC100781573 LOC101262330 LOC9267223 LOC100193112 LOC103869953 LOC100248650 LOC7470965 LOC11426353 LOC123160333 LOC123147819 LOC123409951 LOC107939189 LOC111206250 BNAC05G38480D LOC8072906 LOC102599487 LOC102619240 LOC100840031 LOC107813589 LOC107767783
Function* Polynucleotidyl transferase, ribonuclease H-like superfamily protein uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized LOC100193112 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 hypothetical protein uncharacterized exonuclease domain-containing protein At3g15140 putative exonuclease domain-containing protein At3g15140 putative exonuclease domain-containing protein At3g15140
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 3
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi00330 Arginine and proline metabolism 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00270 Cysteine and methionine metabolism 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00270 Cysteine and methionine metabolism 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00770 Pantothenate and CoA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820745 100781573 101262330 9267223 100193112 103869953 100248650 7470965 11426353 123160333 123147819 123409951 107939189 111206250 106397316 8072906 102599487 102619240 100840031 107813589 107767783
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