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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   TRM11   tRNA modification 11 protein 
 ath-r.7   TRM11   tRNA modification 11 protein 
 ath-m.9   TRM11   tRNA modification 11 protein 
 ath-e.2   TRM11   tRNA modification 11 protein 
 ath-m.4.bio   TRM11   tRNA modification 11 protein 
 ath-m.4.hor   TRM11   tRNA modification 11 protein 
 ath-m.4.lig   TRM11   tRNA modification 11 protein 
 ath-m.4.str   TRM11   tRNA modification 11 protein 
 ath-m.4.tis   TRM11   tRNA modification 11 protein 
 gma-u.5   100814705   tRNA (guanine(10)-N2)-methyltransferase homolog 
 gma-u.5   100790476   tRNA (guanine(10)-N2)-methyltransferase homolog 
 vvi-u.5   100255656   uncharacterized LOC100255656 
 ppo-u.5   7473017   uncharacterized LOC7473017 
 mtr-u.5   25493300   tRNA (guanine(10)-N2)-methyltransferase homolog 
 sly-u.5   101246388   uncharacterized LOC101246388 
 osa-u.5   4329664   uncharacterized LOC4329664 
 zma-u.5   100280406   uncharacterized LOC100280406 

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Top 50 coexpressed genes to TRM11 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TRM11 (ath-u.5 coexpression data)

CoexMap"822245"


athTRM11 | Entrez gene ID : 822245      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 9 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080180 [list] [network] 2-methylguanosine metabolic process  (1 genes)  IMP  
GO:0006400 [list] [network] tRNA modification  (41 genes)  IMP  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_566792.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 3,  nucl 1,  chlo_mito 1  (predict for NP_566792.1)
Subcellular
localization
TargetP
scret 5,  other 3  (predict for NP_566792.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
TRM11

.
ath-r.7
for
TRM11

.
ath-m.9
for
TRM11

.
ath-e.2
for
TRM11

.
ath-m.4.bio
for
TRM11

.
ath-m.4.hor
for
TRM11

.
ath-m.4.lig
for
TRM11

.
ath-m.4.str
for
TRM11

.
ath-m.4.tis
for
TRM11

.
gma-u.5
for
100814705

.
gma-u.5
for
100790476

.
vvi-u.5
for
100255656

.
ppo-u.5
for
7473017

.
mtr-u.5
for
25493300

.
sly-u.5
for
101246388

.
osa-u.5
for
4329664

.
zma-u.5
for
100280406

.


Ortholog ID: 5765
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol TRM11 LOC100814705 LOC100790476 LOC101246388 LOC4329664 LOC100280406 LOC103875301 LOC103854318 LOC100255656 LOC7473017 LOC25493300 LOC123060501 LOC123190571 LOC123427973 LOC123439550 LOC107894055 LOC107900967 LOC106349338 LOC106402390 CHLRE_08g359100v5 LOC8064270 LOC102592975 LOC102627618 LOC100840754 LOC107763736 LOC107786049
Function* tRNA modification 11 protein tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog uncharacterized LOC101246388 uncharacterized LOC4329664 uncharacterized LOC100280406 tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog uncharacterized LOC100255656 uncharacterized LOC7473017 tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog uncharacterized protein tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog uncharacterized LOC102627618 tRNA (guanine(10)-N2)-methyltransferase homolog uncharacterized LOC107763736 uncharacterized LOC107786049
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
sly03020 RNA polymerase 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 13
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822245 100814705 100790476 101246388 4329664 100280406 103875301 103854318 100255656 7473017 25493300 123060501 123190571 123427973 123439550 107894055 107900967 106349338 106402390 5727857 8064270 102592975 102627618 100840754 107763736 107786049
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