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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G50520   Phosphoglycerate mutase family protein 
 ath-r.7   AT3G50520   Phosphoglycerate mutase family protein 
 ath-m.9   AT3G50520   Phosphoglycerate mutase family protein 
 ath-e.2   AT3G50520   Phosphoglycerate mutase family protein 
 ath-m.4.bio   AT3G50520   Phosphoglycerate mutase family protein 
 ath-m.4.hor   AT3G50520   Phosphoglycerate mutase family protein 
 ath-m.4.lig   AT3G50520   Phosphoglycerate mutase family protein 
 ath-m.4.str   AT3G50520   Phosphoglycerate mutase family protein 
 ath-m.4.tis   AT3G50520   Phosphoglycerate mutase family protein 
 ath-u.5   AT5G04120   Phosphoglycerate mutase family protein 
 gma-u.5   100804369   probable phosphoglycerate mutase gpmB-like 
 gma-u.5   100802260   phosphoglycerate mutase-like protein 4 
 vvi-u.5   100853988   phosphoglycerate mutase-like protein 4 
 ppo-u.5   7477959   phosphoglycerate mutase-like protein 4 
 mtr-u.5   11406747   phosphoglycerate mutase-like protein 4 
 mtr-u.5   11417969   phosphoglycerate mutase-like protein 4 
 sly-u.5   101265096   phosphoglycerate mutase-like protein 4 
 osa-u.5   9270925   phosphoglycerate mutase-like protein 4 
 osa-u.5   4349723   phosphoglycerate mutase-like protein 4 
 zma-u.5   100381976   Pentatricopeptide repeat-containing protein 
 zma-u.5   100284555   phosphoglycerate mutase gpmB 

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Top 50 coexpressed genes to AT3G50520 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G50520 (ath-u.5 coexpression data)

CoexMap"824216"


athAT3G50520 | Entrez gene ID : 824216      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 10 2 1 1 2 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00010 [list] [network] Glycolysis / Gluconeogenesis (119 genes)
ath00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)
ath01200 [list] [network] Carbon metabolism (275 genes)
ath01230 [list] [network] Biosynthesis of amino acids (242 genes)
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_190621.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 3  (predict for NP_190621.1)
Subcellular
localization
TargetP
other 8  (predict for NP_190621.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G50520

.
ath-r.7
for
AT3G50520

.
ath-m.9
for
AT3G50520

.
ath-e.2
for
AT3G50520

.
ath-m.4.bio
for
AT3G50520

.
ath-m.4.hor
for
AT3G50520

.
ath-m.4.lig
for
AT3G50520

.
ath-m.4.str
for
AT3G50520

.
ath-m.4.tis
for
AT3G50520

.
ath-u.5
for
AT5G04120

.
gma-u.5
for
100804369

.
gma-u.5
for
100802260

.
vvi-u.5
for
100853988

.
ppo-u.5
for
7477959

.
mtr-u.5
for
11406747

.
mtr-u.5
for
11417969

.
sly-u.5
for
101265096

.
osa-u.5
for
9270925

.
osa-u.5
for
4349723

.
zma-u.5
for
100381976

.
zma-u.5
for
100284555

.


Ortholog ID: 3467
Species ath ath gma gma sly osa zma zma bra vvi ppo mtr mtr tae tae hvu hvu ghi bna cre sbi sbi sot cit bdi nta nta
Symbol AT5G04120 AT3G50520 LOC100804369 LOC100802260 LOC101265096 LOC4349723 LOC100381976 LOC100284555 LOC103828089 LOC100853988 LOC7477959 LOC11417969 LOC11406747 LOC123106844 LOC123132210 LOC123395216 LOC123403679 LOC107897819 LOC106423724 CHLRE_10g460300v5 LOC8083557 LOC8085617 LOC102592733 LOC102607389 LOC100830961 LOC107763739 LOC107761213
Function* Phosphoglycerate mutase family protein Phosphoglycerate mutase family protein probable phosphoglycerate mutase gpmB-like phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 Pentatricopeptide repeat-containing protein phosphoglycerate mutase gpmB phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 metal-independent phosphoserine phosphatase-like uncharacterized protein phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4 phosphoglycerate mutase-like protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 2
ath01200 Carbon metabolism 2
ath01230 Biosynthesis of amino acids 2
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma01230 Biosynthesis of amino acids 3
gma00260 Glycine, serine and threonine metabolism 2
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 4
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00260 Glycine, serine and threonine metabolism 4
sly00280 Valine, leucine and isoleucine degradation 3
sly00561 Glycerolipid metabolism 2
sly00310 Lysine degradation 2
sly00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00052 Galactose metabolism 2
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 6
tae01200 Carbon metabolism 4
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
tae00220 Arginine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00260 Glycine, serine and threonine metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00520 Amino sugar and nucleotide sugar metabolism 3
hvu01250 Biosynthesis of nucleotide sugars 3
hvu00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi04144 Endocytosis 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 3
bna00260 Glycine, serine and threonine metabolism 3
bna01200 Carbon metabolism 3
bna01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
sbi00564 Glycerophospholipid metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 5
sot01200 Carbon metabolism 4
sot00470 D-Amino acid metabolism 3
sot00630 Glyoxylate and dicarboxylate metabolism 3
sot00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
cit00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00260 Glycine, serine and threonine metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta03010 Ribosome 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00260 Glycine, serine and threonine metabolism 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830290 824216 100804369 100802260 101265096 4349723 100381976 100284555 103828089 100853988 7477959 11417969 11406747 123106844 123132210 123395216 123403679 107897819 106423724 5724149 8083557 8085617 102592733 102607389 100830961 107763739 107761213
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