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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G52230   uncharacterized protein 
 ath-r.7   AT3G52230   uncharacterized protein 
 ath-m.9   AT3G52230   uncharacterized protein 
 ath-e.2   AT3G52230   uncharacterized protein 
 ath-m.4.bio   AT3G52230   uncharacterized protein 
 ath-m.4.hor   AT3G52230   uncharacterized protein 
 ath-m.4.lig   AT3G52230   uncharacterized protein 
 ath-m.4.str   AT3G52230   uncharacterized protein 
 ath-m.4.tis   AT3G52230   uncharacterized protein 
 gma-u.5   100788736   uncharacterized LOC100788736 
 gma-u.5   100799217   uncharacterized LOC100799217 
 gma-u.5   100791948   uncharacterized LOC100791948 
 vvi-u.5   100247238   uncharacterized LOC100247238 
 ppo-u.5   7468466   uncharacterized LOC7468466 
 mtr-u.5   25485802   uncharacterized LOC25485802 
 sly-u.5   101255849   uncharacterized LOC101255849 
 osa-u.5   4323834   uncharacterized LOC4323834 
 zma-u.5   100285818   Chloroplast outer envelope 24 kD protein 

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Top 50 coexpressed genes to AT3G52230 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G52230 (ath-u.5 coexpression data)

CoexMap"824388"


athAT3G52230 | Entrez gene ID : 824388      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 9 3 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009707 [list] [network] chloroplast outer membrane  (46 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_566963.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  mito 1  (predict for NP_566963.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for NP_566963.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G52230

.
ath-r.7
for
AT3G52230

.
ath-m.9
for
AT3G52230

.
ath-e.2
for
AT3G52230

.
ath-m.4.bio
for
AT3G52230

.
ath-m.4.hor
for
AT3G52230

.
ath-m.4.lig
for
AT3G52230

.
ath-m.4.str
for
AT3G52230

.
ath-m.4.tis
for
AT3G52230

.
gma-u.5
for
100788736

.
gma-u.5
for
100799217

.
gma-u.5
for
100791948

.
vvi-u.5
for
100247238

.
ppo-u.5
for
7468466

.
mtr-u.5
for
25485802

.
sly-u.5
for
101255849

.
osa-u.5
for
4323834

.
zma-u.5
for
100285818

.


Ortholog ID: 10819
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta
Symbol AT3G52230 LOC100788736 LOC100791948 LOC101255849 LOC4323834 LOC100285818 LOC103841161 LOC100247238 LOC7468466 LOC25485802 LOC123072789 LOC123063633 LOC123445655 LOC107904344 LOC107904206 BNAC08G23540D LOC106402550 LOC8078049 LOC107063245 LOC102626912 LOC100836745 LOC107813423
Function* uncharacterized protein uncharacterized LOC100788736 uncharacterized LOC100791948 uncharacterized LOC101255849 uncharacterized LOC4323834 Chloroplast outer envelope 24 kD protein uncharacterized LOC103841161 uncharacterized LOC100247238 uncharacterized LOC7468466 uncharacterized LOC25485802 uncharacterized LOC123072789 uncharacterized LOC123063633 uncharacterized LOC123445655 uncharacterized LOC107904344 uncharacterized LOC107904206 uncharacterized BNAC08G23540D uncharacterized LOC106402550 uncharacterized LOC8078049 uncharacterized LOC107063245 uncharacterized LOC102626912 uncharacterized LOC100836745 uncharacterized LOC107813423
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 5
zma03420 Nucleotide excision repair 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot00230 Purine metabolism 2
sot01232 Nucleotide metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824388 100788736 100791948 101255849 4323834 100285818 103841161 100247238 7468466 25485802 123072789 123063633 123445655 107904344 107904206 106367839 106402550 8078049 107063245 102626912 100836745 107813423
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