ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107904206	uncharacterized LOC107904206
ghi-r.1	107904344	uncharacterized LOC107904344
ath-u.5	AT3G52230	uncharacterized protein
bra-r.6	103841161	uncharacterized LOC103841161
bna-r.1	106402550	uncharacterized LOC106402550
bna-r.1	BNAC08G23540D	uncharacterized BNAC08G23540D
cit-r.1	102626912	uncharacterized LOC102626912
gma-u.5	100799217	uncharacterized LOC100799217
gma-u.5	100791948	uncharacterized LOC100791948
gma-u.5	100788736	uncharacterized LOC100788736
vvi-u.5	100247238	uncharacterized LOC100247238
ppo-u.5	7468466	uncharacterized LOC7468466
mtr-u.5	25485802	uncharacterized LOC25485802
sly-u.5	101255849	uncharacterized LOC101255849
sot-r.1	107063245	uncharacterized LOC107063245
nta-r.1	107813423	uncharacterized LOC107813423
osa-u.5	4323834	uncharacterized LOC4323834
zma-u.5	100285818	Chloroplast outer envelope 24 kD protein
tae-r.2	123080958	uncharacterized LOC123080958
tae-r.2	123072789	uncharacterized LOC123072789
tae-r.2	123063633	uncharacterized LOC123063633
hvu-r.1	123445655	uncharacterized LOC123445655
sbi-r.1	8078049	uncharacterized LOC8078049
bdi-r.1	100836745	uncharacterized LOC100836745

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(1647 genes)

IEA

GO MF

Protein

XP_016685983.1 [sequence] [blastp]
XP_016685984.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 2, chlo 1, mito 1, extr 1, chlo_mito 1	(predict for XP_016685983.1)
nucl 5, mito 3, chlo 2	(predict for XP_016685984.2)

Subcellular
localization
TargetP

other 8	(predict for XP_016685983.1)
other 6, chlo 4	(predict for XP_016685984.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107904206	ghi-r.1 for 107904344	ath-u.5 for AT3G52230	bra-r.6 for 103841161	bna-r.1 for 106402550	bna-r.1 for BNAC08G23540D	cit-r.1 for 102626912	gma-u.5 for 100799217	gma-u.5 for 100791948	gma-u.5 for 100788736	vvi-u.5 for 100247238	ppo-u.5 for 7468466	mtr-u.5 for 25485802	sly-u.5 for 101255849	sot-r.1 for 107063245	nta-r.1 for 107813423	osa-u.5 for 4323834	zma-u.5 for 100285818	tae-r.2 for 123080958	tae-r.2 for 123072789	tae-r.2 for 123063633	hvu-r.1 for 123445655	sbi-r.1 for 8078049	bdi-r.1 for 100836745

Ortholog

Ortholog ID: 10819

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107904206

uncharacterized LOC107904344

uncharacterized protein

uncharacterized LOC103841161

uncharacterized LOC106402550

uncharacterized BNAC08G23540D

uncharacterized LOC102626912

uncharacterized LOC100799217

uncharacterized LOC100791948

uncharacterized LOC100788736

uncharacterized LOC100247238

uncharacterized LOC7468466

uncharacterized LOC25485802

uncharacterized LOC101255849

uncharacterized LOC107063245

uncharacterized LOC107813423

uncharacterized LOC4323834

Chloroplast outer envelope 24 kD protein

uncharacterized LOC123080958

uncharacterized LOC123072789

uncharacterized LOC123063633

uncharacterized LOC123445655

uncharacterized LOC8078049

uncharacterized LOC100836745

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	3
bra00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	4
sot00230	Purine metabolism	2
sot01232	Nucleotide metabolism	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	3
osa03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	5
zma03420	Nucleotide excision repair	2
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3
tae03020	RNA polymerase	3
tae03420	Nucleotide excision repair	3
tae03022	Basal transcription factors	3

Expression

Expression pattern

Entrez Gene ID^*

107904206

107904344

824388

103841161

106402550

106367839

102626912

100799217

100791948

100788736

100247238

7468466

25485802

101255849

107063245

107813423

4323834

100285818

123080958

123072789

123063633

123445655

8078049

100836745

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107904206 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107904206 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	2	1	3	1	1	1	1	1	1	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107904206 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107904206 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**