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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   MLH1   MUTL-homologue 1 
 ath-r.7   MLH1   MUTL-homologue 1 
 ath-m.9   MLH1   MUTL-homologue 1 
 ath-e.2   MLH1   MUTL-homologue 1 
 ath-m.4.bio   MLH1   MUTL-homologue 1 
 ath-m.4.hor   MLH1   MUTL-homologue 1 
 ath-m.4.lig   MLH1   MUTL-homologue 1 
 ath-m.4.str   MLH1   MUTL-homologue 1 
 ath-m.4.tis   MLH1   MUTL-homologue 1 
 bra-r.6   103858512   DNA mismatch repair protein MLH1 
 bna-r.1   106435650   DNA mismatch repair protein MLH1 
 bna-r.1   106438479   DNA mismatch repair protein MLH1 
 ghi-r.1   107895080   DNA mismatch repair protein MLH1 
 ghi-r.1   107920384   DNA mismatch repair protein MLH1 
 cit-r.1   102610589   DNA mismatch repair protein MLH1 
 gma-u.5   100794788   DNA mismatch repair protein MLH1 
 vvi-u.5   100854779   DNA mismatch repair protein MLH1 
 ppo-u.5   7455278   DNA mismatch repair protein MLH1 
 mtr-u.5   11419396   DNA mismatch repair protein MLH1 
 sly-u.5   MLH1   MLH1 protein 
 sot-r.1   102592720   DNA mismatch repair protein MLH1 
 nta-r.1   107808834   DNA mismatch repair protein MLH1 
 nta-r.1   142169408   DNA mismatch repair protein MLH1-like 
 osa-u.5   4325393   DNA mismatch repair protein MLH1 
 zma-u.5   103636271   DNA mismatch repair protein MLH1 
 tae-r.2   123080803   DNA mismatch repair protein MLH1 
 tae-r.2   123080801   DNA mismatch repair protein MLH1 
 tae-r.2   123072612   DNA mismatch repair protein MLH1 
 hvu-r.1   123445574   DNA mismatch repair protein MLH1 
 sbi-r.1   8074096   DNA mismatch repair protein MLH1 
 bdi-r.1   100845473   DNA mismatch repair protein MLH1 
 cre-r.1   CHLRE_01g036050v5   uncharacterized protein 

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Top 50 coexpressed genes to MLH1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MLH1 (ath-u.5 coexpression data)

CoexMap"826493"


athMLH1 | Entrez gene ID : 826493      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03430 [list] [network] Mismatch repair (32 genes)
ath03460 [list] [network] Fanconi anemia pathway (46 genes)
GO BP
GO:0006312 [list] [network] mitotic recombination  (5 genes)  IMP  
GO:0006298 [list] [network] mismatch repair  (12 genes)  ISS  
GO:0009845 [list] [network] seed germination  (111 genes)  IMP  
GO:0009555 [list] [network] pollen development  (385 genes)  IMP  
GO:0048316 [list] [network] seed development  (775 genes)  IMP  
GO:0010154 [list] [network] fruit development  (807 genes)  IMP  
GO CC
GO:0000785 [list] [network] chromatin  (140 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0030674 [list] [network] protein-macromolecule adaptor activity  (163 genes)  ISS  
Protein NP_001328542.1 [sequence] [blastp]
NP_567345.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  mito 3,  chlo 2,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for NP_001328542.1)
cyto 6,  nucl 2,  chlo 1,  vacu 1  (predict for NP_567345.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001328542.1)
other 8,  chlo 3  (predict for NP_567345.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
MLH1
ath-r.7
for
MLH1
ath-m.9
for
MLH1
ath-e.2
for
MLH1
ath-m.4.bio
for
MLH1
ath-m.4.hor
for
MLH1
ath-m.4.lig
for
MLH1
ath-m.4.str
for
MLH1
ath-m.4.tis
for
MLH1
bra-r.6
for
103858512
bna-r.1
for
106435650
bna-r.1
for
106438479
ghi-r.1
for
107895080
ghi-r.1
for
107920384
cit-r.1
for
102610589
gma-u.5
for
100794788
vvi-u.5
for
100854779
ppo-u.5
for
7455278
mtr-u.5
for
11419396
sly-u.5
for
MLH1
sot-r.1
for
102592720
nta-r.1
for
107808834
nta-r.1
for
142169408
osa-u.5
for
4325393
zma-u.5
for
103636271
tae-r.2
for
123080803
tae-r.2
for
123080801
tae-r.2
for
123072612
hvu-r.1
for
123445574
sbi-r.1
for
8074096
bdi-r.1
for
100845473
cre-r.1
for
CHLRE_01g036050v5


Ortholog ID: 9560
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol MLH1 LOC103858512 LOC106435650 LOC106438479 LOC107895080 LOC107920384 LOC102610589 LOC100794788 LOC100854779 LOC7455278 LOC11419396 MLH1 LOC102592720 LOC107808834 LOC142169408 LOC4325393 LOC103636271 LOC123080803 LOC123080801 LOC123150943 LOC123445574 LOC8074096 LOC100845473 CHLRE_01g036050v5
Function* MUTL-homologue 1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 MLH1 protein DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1-like DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 DNA mismatch repair protein MLH1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 2
bra03430 Mismatch repair 2
bra03460 Fanconi anemia pathway 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 4
bna03430 Mismatch repair 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03430 Mismatch repair 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
ghi03020 RNA polymerase 2
ghi00061 Fatty acid biosynthesis 2
ghi00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
ghi03020 RNA polymerase 2
ghi00061 Fatty acid biosynthesis 2
ghi00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03430 Mismatch repair 8
gma03030 DNA replication 8
gma03410 Base excision repair 7
gma03420 Nucleotide excision repair 7
gma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 5
sly03440 Homologous recombination 3
sly03013 Nucleocytoplasmic transport 2
sly03430 Mismatch repair 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 5
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 5
tae03430 Mismatch repair 5
tae03460 Fanconi anemia pathway 5
tae03040 Spliceosome 2
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 4
tae03460 Fanconi anemia pathway 4
tae03040 Spliceosome 2
tae03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 5
tae03430 Mismatch repair 5
tae03460 Fanconi anemia pathway 5
tae03040 Spliceosome 2
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03430 Mismatch repair 2
bdi03460 Fanconi anemia pathway 2
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826493 103858512 106435650 106438479 107895080 107920384 102610589 100794788 100854779 7455278 11419396 100125910 102592720 107808834 142169408 4325393 103636271 123080803 123080801 123150943 123445574 8074096 100845473 5715471
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