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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   GRH1   GRR1-like protein 1 
 ath-r.7   GRH1   GRR1-like protein 1 
 ath-m.9   GRH1   GRR1-like protein 1 
 ath-e.2   GRH1   GRR1-like protein 1 
 ath-m.4.bio   GRH1   GRR1-like protein 1 
 ath-m.4.hor   GRH1   GRR1-like protein 1 
 ath-m.4.lig   GRH1   GRR1-like protein 1 
 ath-m.4.str   GRH1   GRR1-like protein 1 
 ath-m.4.tis   GRH1   GRR1-like protein 1 
 ath-u.5   TIR1   F-box/RNI-like superfamily protein 
 gma-u.5   TIR1D   protein TRANSPORT INHIBITOR RESPONSE 1D 
 gma-u.5   TIR1A   protein TRANSPORT INHIBITOR RESPONSE 1A 
 vvi-u.5   100233127   protein TRANSPORT INHIBITOR RESPONSE 1 
 vvi-u.5   100264085   protein TRANSPORT INHIBITOR RESPONSE 1 
 vvi-u.5   100252378   protein AUXIN SIGNALING F-BOX 2 
 ppo-u.5   18111294   protein TRANSPORT INHIBITOR RESPONSE 1 
 ppo-u.5   7491325   protein TRANSPORT INHIBITOR RESPONSE 1 
 mtr-u.5   25484780   protein TRANSPORT INHIBITOR RESPONSE 1 
 sly-u.5   100316892   TIR1-like protein 
 osa-u.5   4337827   transport inhibitor response 1-like protein Os05g0150500 
 zma-u.5   103635896   transport inhibitor response 1-like protein Os05g0150500 

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Top 50 coexpressed genes to GRH1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GRH1 (ath-u.5 coexpression data)

CoexMap"828045"


athGRH1 | Entrez gene ID : 828045      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 10 2 3 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:0045014 [list] [network] carbon catabolite repression of transcription by glucose  (1 genes)  TAS  
GO:0010152 [list] [network] pollen maturation  (19 genes)  IGI  
GO:0009734 [list] [network] auxin-activated signaling pathway  (65 genes)  ISS  
GO:0048443 [list] [network] stamen development  (113 genes)  IGI  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (219 genes)  IGI TAS  
GO:0009733 [list] [network] response to auxin  (344 genes)  IMP  
GO:0048589 [list] [network] developmental growth  (423 genes)  IGI  
GO CC
GO:0043224 [list] [network] nuclear SCF ubiquitin ligase complex  (1 genes)  IDA  
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (41 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA ISM  
GO MF
GO:0000822 [list] [network] inositol hexakisphosphate binding  (7 genes)  ISS  
GO:0010011 [list] [network] auxin binding  (10 genes)  IGI ISS  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (268 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_567255.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  cysk 1  (predict for NP_567255.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for NP_567255.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
GRH1

.
ath-r.7
for
GRH1

.
ath-m.9
for
GRH1

.
ath-e.2
for
GRH1

.
ath-m.4.bio
for
GRH1

.
ath-m.4.hor
for
GRH1

.
ath-m.4.lig
for
GRH1

.
ath-m.4.str
for
GRH1

.
ath-m.4.tis
for
GRH1

.
ath-u.5
for
TIR1

.
gma-u.5
for
TIR1D

.
gma-u.5
for
TIR1A

.
vvi-u.5
for
100233127

.
vvi-u.5
for
100264085

.
vvi-u.5
for
100252378

.
ppo-u.5
for
18111294

.
ppo-u.5
for
7491325

.
mtr-u.5
for
25484780

.
sly-u.5
for
100316892

.
osa-u.5
for
4337827

.
zma-u.5
for
103635896

.


Ortholog ID: 2659
Species ath ath gma gma sly osa zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol TIR1 GRH1 TIR1C TIR1A LOC100316892 LOC4337827 LOC103635896 LOC103858715 LOC103842104 LOC100264085 LOC100233127 LOC18111294 LOC7491325 LOC25484780 LOC123112721 LOC123191327 LOC123403296 LOC123425454 LOC107949837 LOC107924496 LOC106431491 LOC111200796 LOC8069501 LOC102578728 LOC102578999 LOC102630854 LOC100822026 LOC107770213 LOC107791833
Function* F-box/RNI-like superfamily protein GRR1-like protein 1 protein TRANSPORT INHIBITOR RESPONSE 1C protein TRANSPORT INHIBITOR RESPONSE 1A TIR1-like protein transport inhibitor response 1-like protein Os05g0150500 transport inhibitor response 1-like protein Os05g0150500 GRR1-like protein 1 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 transport inhibitor response 1-like protein Os05g0150500 transport inhibitor response 1-like protein Os05g0150500 transport inhibitor response 1-like protein Os11g0515500 transport inhibitor response 1-like protein Os05g0150500 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 GRR1-like protein 1 GRR1-like protein 1 transport inhibitor response 1-like protein Os05g0150500 protein TRANSPORT INHIBITOR RESPONSE 1-like protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 transport inhibitor response 1-like protein Os05g0150500 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
tae00310 Lysine degradation 5
tae00330 Arginine and proline metabolism 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu04144 Endocytosis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03040 Spliceosome 2
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta01240 Biosynthesis of cofactors 3
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825473 828045 100779021 100809794 100316892 4337827 103635896 103858715 103842104 100264085 100233127 18111294 7491325 25484780 123112721 123191327 123403296 123425454 107949837 107924496 106431491 111200796 8069501 102578728 102578999 102630854 100822026 107770213 107791833
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