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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G28830   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-r.7   AT4G28830   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.9   AT4G28830   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-e.2   AT4G28830   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.bio   AT4G28830   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.hor   AT4G28830   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.lig   AT4G28830   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.str   AT4G28830   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.tis   AT4G28830   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 bra-r.6   103861855   methyltransferase-like protein 5 
 bra-r.6   103854070   methyltransferase-like protein 5 
 bna-r.1   106386096   rRNA N6-adenosine-methyltransferase METTL5-like 
 ghi-r.1   107962753   rRNA N6-adenosine-methyltransferase METTL5 
 ghi-r.1   107901257   rRNA N6-adenosine-methyltransferase METTL5 
 cit-r.1   102629466   uncharacterized LOC102629466 
 gma-u.5   100305753   AdoMet-MTases superfamily protein 
 vvi-u.5   100264490   uncharacterized LOC100264490 
 ppo-u.5   7488926   uncharacterized LOC7488926 
 mtr-u.5   11425160   rRNA N6-adenosine-methyltransferase METTL5 
 sly-u.5   101253662   uncharacterized LOC101253662 
 sot-r.1   102581102   methyltransferase-like protein 5 
 nta-r.1   107797895   uncharacterized LOC107797895 
 nta-r.1   107775069   uncharacterized LOC107775069 
 osa-u.5   4340217   uncharacterized LOC4340217 
 zma-u.5   103629523   rRNA N6-adenosine-methyltransferase METTL5 
 zma-u.5   100191332   uncharacterized LOC100191332 
 tae-r.2   123151188   rRNA N6-adenosine-methyltransferase METTL5 
 tae-r.2   123155769   rRNA N6-adenosine-methyltransferase METTL5 
 tae-r.2   542936   rRNA N6-adenosine-methyltransferase METTL5 
 hvu-r.1   123413512   rRNA N6-adenosine-methyltransferase METTL5 
 sbi-r.1   8070869   methyltransferase-like protein 5 
 bdi-r.1   100824888   methyltransferase-like protein 5 
 cre-r.1   CHLRE_08g384700v5   uncharacterized protein 

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Top 50 coexpressed genes to AT4G28830 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G28830 (ath-u.5 coexpression data)

CoexMap"829004"


athAT4G28830 | Entrez gene ID : 829004      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 1 2 1 1 1 1 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA ISM  
GO MF
Protein NP_001078464.1 [sequence] [blastp]
NP_001328315.1 [sequence] [blastp]
NP_001328316.1 [sequence] [blastp]
NP_194612.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  mito 2,  cyto_pero 2,  cyto_plas 2  (predict for NP_001078464.1)
cyto 6,  nucl 1,  mito 1,  chlo 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1,  mito_plas 1  (predict for NP_001328315.1)
cyto 6,  nucl 1,  mito 1,  chlo 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1,  mito_plas 1  (predict for NP_001328316.1)
cyto 6,  nucl 1,  mito 1,  chlo 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1,  mito_plas 1  (predict for NP_194612.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001078464.1)
other 6  (predict for NP_001328315.1)
other 6  (predict for NP_001328316.1)
other 6  (predict for NP_194612.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G28830
ath-r.7
for
AT4G28830
ath-m.9
for
AT4G28830
ath-e.2
for
AT4G28830
ath-m.4.bio
for
AT4G28830
ath-m.4.hor
for
AT4G28830
ath-m.4.lig
for
AT4G28830
ath-m.4.str
for
AT4G28830
ath-m.4.tis
for
AT4G28830
bra-r.6
for
103861855
bra-r.6
for
103854070
bna-r.1
for
106386096
ghi-r.1
for
107962753
ghi-r.1
for
107901257
cit-r.1
for
102629466
gma-u.5
for
100305753
vvi-u.5
for
100264490
ppo-u.5
for
7488926
mtr-u.5
for
11425160
sly-u.5
for
101253662
sot-r.1
for
102581102
nta-r.1
for
107797895
nta-r.1
for
107775069
osa-u.5
for
4340217
zma-u.5
for
103629523
zma-u.5
for
100191332
tae-r.2
for
123151188
tae-r.2
for
123155769
tae-r.2
for
542936
hvu-r.1
for
123413512
sbi-r.1
for
8070869
bdi-r.1
for
100824888
cre-r.1
for
CHLRE_08g384700v5


Ortholog ID: 8564
Species ath bra bra ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol AT4G28830 LOC103861855 LOC103854070 LOC107962753 LOC107901257 LOC102629466 LOC100305753 LOC100264490 LOC7488926 LOC11425160 LOC101253662 LOC102581102 LOC107797895 LOC107775069 LOC4340217 LOC103629523 LOC100191332 LOC123151188 LOC123155769 LOC542936 LOC123413512 LOC8070869 LOC100824888 CHLRE_08g384700v5
Function* S-adenosyl-L-methionine-dependent methyltransferases superfamily protein methyltransferase-like protein 5 methyltransferase-like protein 5 rRNA N6-adenosine-methyltransferase METTL5 rRNA N6-adenosine-methyltransferase METTL5 uncharacterized LOC102629466 AdoMet-MTases superfamily protein uncharacterized LOC100264490 uncharacterized LOC7488926 rRNA N6-adenosine-methyltransferase METTL5 uncharacterized LOC101253662 methyltransferase-like protein 5 uncharacterized LOC107797895 uncharacterized LOC107775069 uncharacterized LOC4340217 rRNA N6-adenosine-methyltransferase METTL5 uncharacterized LOC100191332 rRNA N6-adenosine-methyltransferase METTL5 rRNA N6-adenosine-methyltransferase METTL5 rRNA N6-adenosine-methyltransferase METTL5 rRNA N6-adenosine-methyltransferase METTL5 methyltransferase-like protein 5 methyltransferase-like protein 5 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03040 Spliceosome 2
bra03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 5
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 5
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
gma00190 Oxidative phosphorylation 2
gma03010 Ribosome 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 3
ppo03020 RNA polymerase 2
ppo03040 Spliceosome 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
nta03083 Polycomb repressive complex 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 3
tae00061 Fatty acid biosynthesis 2
tae00780 Biotin metabolism 2
tae01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00960 Tropane, piperidine and pyridine alkaloid biosynthesis 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
hvu00910 Nitrogen metabolism 2
hvu01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00220 Arginine biosynthesis 4
cre00250 Alanine, aspartate and glutamate metabolism 3
cre01230 Biosynthesis of amino acids 2
cre00230 Purine metabolism 2
cre00240 Pyrimidine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829004 103861855 103854070 107962753 107901257 102629466 100305753 100264490 7488926 11425160 101253662 102581102 107797895 107775069 4340217 103629523 100191332 123151188 123155769 542936 123413512 8070869 100824888 5719804
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