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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G31040   CemA-like proton extrusion protein-like protein 
 ath-r.7   AT4G31040   CemA-like proton extrusion protein-like protein 
 ath-m.9   AT4G31040   CemA-like proton extrusion protein-like protein 
 ath-e.2   AT4G31040   CemA-like proton extrusion protein-like protein 
 ath-m.4.bio   AT4G31040   CemA-like proton extrusion protein-like protein 
 ath-m.4.hor   AT4G31040   CemA-like proton extrusion protein-like protein 
 ath-m.4.lig   AT4G31040   CemA-like proton extrusion protein-like protein 
 ath-m.4.str   AT4G31040   CemA-like proton extrusion protein-like protein 
 ath-m.4.tis   AT4G31040   CemA-like proton extrusion protein-like protein 
 gma-u.5   100799467   chloroplast envelope membrane protein 
 gma-u.5   100792431   chloroplast envelope membrane protein 
 vvi-u.5   100267296   chloroplast envelope membrane protein 
 ppo-u.5   18107888   chloroplast envelope membrane protein 
 ppo-u.5   7487233   chloroplast envelope membrane protein 
 mtr-u.5   25497036   chloroplast envelope membrane protein 
 sly-u.5   101263730   protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic 
 osa-u.5   4344969   protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic 
 zma-u.5   100216851   uncharacterized LOC100216851 
 zma-u.5   103630668   uncharacterized LOC103630668 

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Top 50 coexpressed genes to AT4G31040 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G31040 (ath-u.5 coexpression data)

CoexMap"829231"


athAT4G31040 | Entrez gene ID : 829231      
Species ath gma vvi ppo mtr sly osa zma nta bna tae bdi sot bra sbi hvu cit cre ghi
Paralog 9 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051453 [list] [network] regulation of intracellular pH  (4 genes)  IDA  
GO:0034755 [list] [network] iron ion transmembrane transport  (12 genes)  IDA  
GO:0010196 [list] [network] nonphotochemical quenching  (17 genes)  IMP  
GO:1902600 [list] [network] proton transmembrane transport  (18 genes)  IDA  
GO:0071805 [list] [network] potassium ion transmembrane transport  (23 genes)  IDA  
GO CC
GO:0009706 [list] [network] chloroplast inner membrane  (66 genes)  IDA  
GO:0031969 [list] [network] chloroplast membrane  (123 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0015093 [list] [network] ferrous iron transmembrane transporter activity  (1 genes)  IDA  
GO:0015386 [list] [network] potassium:proton antiporter activity  (11 genes)  IDA  
Protein NP_567865.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  vacu 2  (predict for NP_567865.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_567865.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G31040

.
ath-r.7
for
AT4G31040

.
ath-m.9
for
AT4G31040

.
ath-e.2
for
AT4G31040

.
ath-m.4.bio
for
AT4G31040

.
ath-m.4.hor
for
AT4G31040

.
ath-m.4.lig
for
AT4G31040

.
ath-m.4.str
for
AT4G31040

.
ath-m.4.tis
for
AT4G31040

.
gma-u.5
for
100799467

.
gma-u.5
for
100792431

.
vvi-u.5
for
100267296

.
ppo-u.5
for
18107888

.
ppo-u.5
for
7487233

.
mtr-u.5
for
25497036

.
sly-u.5
for
101263730

.
osa-u.5
for
4344969

.
zma-u.5
for
100216851

.
zma-u.5
for
103630668

.


Ortholog ID: 7301
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol AT4G31040 LOC100792431 LOC100799467 LOC101263730 LOC4344969 LOC100216851 LOC103630668 LOC103852137 LOC100267296 LOC7487233 LOC18107888 LOC25497036 LOC123154455 LOC123169648 LOC123407534 LOC107907390 LOC121229193 LOC106434446 CHLRE_06g260250v5 LOC8059505 LOC102580425 LOC102608858 LOC100840646 LOC107766542 LOC107760347
Function* CemA-like proton extrusion protein-like protein chloroplast envelope membrane protein chloroplast envelope membrane protein protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic uncharacterized LOC100216851 uncharacterized LOC103630668 chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein uncharacterized LOC121229193 chloroplast envelope membrane protein-like uncharacterized protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 4
bra00860 Porphyrin metabolism 3
bra00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 2
ppo00640 Propanoate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 2
ppo00640 Propanoate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 2
tae00920 Sulfur metabolism 2
tae04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829231 100792431 100799467 101263730 4344969 100216851 103630668 103852137 100267296 7487233 18107888 25497036 123154455 123169648 123407534 107907390 121229193 106434446 5722050 8059505 102580425 102608858 100840646 107766542 107760347
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