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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102580425   chloroplast envelope membrane protein 
 sly-u.5   101263730   protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic 
 nta-r.1   107766542   protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic 
 nta-r.1   107760347   protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic-like 
 ath-u.5   AT4G31040   CemA-like proton extrusion protein-like protein 
 gma-u.5   100799467   chloroplast envelope membrane protein 
 gma-u.5   100792431   chloroplast envelope membrane protein 
 bra-r.6   103852137   chloroplast envelope membrane protein 
 vvi-u.5   100267296   chloroplast envelope membrane protein 
 ppo-u.5   18107888   chloroplast envelope membrane protein 
 ppo-u.5   7487233   chloroplast envelope membrane protein 
 mtr-u.5   25497036   chloroplast envelope membrane protein 
 ghi-r.1   121229193   uncharacterized LOC121229193 
 ghi-r.1   107907533   chloroplast envelope membrane protein 
 ghi-r.1   107907390   chloroplast envelope membrane protein 
 bna-r.1   106434446   chloroplast envelope membrane protein-like 
 bna-r.1   106383082   chloroplast envelope membrane protein 
 cit-r.1   102608858   chloroplast envelope membrane protein 
 osa-u.5   4344969   protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic 
 zma-u.5   100216851   uncharacterized LOC100216851 
 zma-u.5   103630668   uncharacterized LOC103630668 
 tae-r.2   123154455   chloroplast envelope membrane protein 
 tae-r.2   123157110   chloroplast envelope membrane protein 
 tae-r.2   123169648   chloroplast envelope membrane protein 
 hvu-r.1   123407534   chloroplast envelope membrane protein 
 sbi-r.1   8059505   chloroplast envelope membrane protein 
 bdi-r.1   100840646   chloroplast envelope membrane protein 
 cre-r.1   CHLRE_06g260250v5   uncharacterized protein 

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Top 50 coexpressed genes to 102580425 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102580425 (sot-r.1 coexpression data)

CoexMap"102580425"


sotLOC102580425 | Entrez gene ID : 102580425    
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 2 1 2 1 1 2 1 3 2 1 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0016020 [list] [network] membrane  (3081 genes)  IEA  
GO MF
Protein XP_006353748.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  vacu 2,  E.R. 1,  mito 1,  extr 1,  cyto_E.R. 1  (predict for XP_006353748.1)
Subcellular
localization
TargetP
chlo 2  (predict for XP_006353748.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102580425
sly-u.5
for
101263730
nta-r.1
for
107766542
nta-r.1
for
107760347
ath-u.5
for
AT4G31040
gma-u.5
for
100799467
gma-u.5
for
100792431
bra-r.6
for
103852137
vvi-u.5
for
100267296
ppo-u.5
for
18107888
ppo-u.5
for
7487233
mtr-u.5
for
25497036
ghi-r.1
for
121229193
ghi-r.1
for
107907533
ghi-r.1
for
107907390
bna-r.1
for
106434446
bna-r.1
for
106383082
cit-r.1
for
102608858
osa-u.5
for
4344969
zma-u.5
for
100216851
zma-u.5
for
103630668
tae-r.2
for
123154455
tae-r.2
for
123157110
tae-r.2
for
123169648
hvu-r.1
for
123407534
sbi-r.1
for
8059505
bdi-r.1
for
100840646
cre-r.1
for
CHLRE_06g260250v5


Ortholog ID: 7301
Species sot sly nta nta ath gma gma bra vvi ppo ppo mtr ghi ghi ghi bna bna cit osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC102580425 LOC101263730 LOC107766542 LOC107760347 AT4G31040 LOC100799467 LOC100792431 LOC103852137 LOC100267296 LOC18107888 LOC7487233 LOC25497036 LOC121229193 LOC107907533 LOC107907390 LOC106434446 LOC106383082 LOC102608858 LOC4344969 LOC100216851 LOC103630668 LOC123154455 LOC123157110 LOC123169648 LOC123407534 LOC8059505 LOC100840646 CHLRE_06g260250v5
Function* chloroplast envelope membrane protein protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic-like CemA-like proton extrusion protein-like protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein uncharacterized LOC121229193 chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein-like chloroplast envelope membrane protein chloroplast envelope membrane protein protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic uncharacterized LOC100216851 uncharacterized LOC103630668 chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein chloroplast envelope membrane protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 4
bra00860 Porphyrin metabolism 3
bra00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 2
ppo00640 Propanoate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 2
ppo00640 Propanoate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 2
tae00920 Sulfur metabolism 2
tae04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102580425 101263730 107766542 107760347 829231 100799467 100792431 103852137 100267296 18107888 7487233 25497036 121229193 107907533 107907390 106434446 106383082 102608858 4344969 100216851 103630668 123154455 123157110 123169648 123407534 8059505 100840646 5722050
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