ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	AT5G08110	UBQ, helicase-c and DEAD-like helicase domain-containing protein
ath-r.7	AT5G08110	UBQ, helicase-c and DEAD-like helicase domain-containing protein
ath-m.9	AT5G08110	UBQ, helicase-c and DEAD-like helicase domain-containing protein
ath-e.2	AT5G08110	UBQ, helicase-c and DEAD-like helicase domain-containing protein
ath-m.4.bio	AT5G08110	UBQ, helicase-c and DEAD-like helicase domain-containing protein
ath-m.4.hor	AT5G08110	UBQ, helicase-c and DEAD-like helicase domain-containing protein
ath-m.4.lig	AT5G08110	UBQ, helicase-c and DEAD-like helicase domain-containing protein
ath-m.4.str	AT5G08110	UBQ, helicase-c and DEAD-like helicase domain-containing protein
ath-m.4.tis	AT5G08110	UBQ, helicase-c and DEAD-like helicase domain-containing protein
bra-r.6	103847576	uncharacterized ATP-dependent helicase YprA
ghi-r.1	107943381	uncharacterized ATP-dependent helicase YprA
ghi-r.1	107912104	uncharacterized ATP-dependent helicase YprA
cit-r.1	102626625	uncharacterized LOC102626625
gma-u.5	100819522	uncharacterized ATP-dependent helicase YprA
vvi-u.5	100257644	uncharacterized LOC100257644
ppo-u.5	7487108	uncharacterized LOC7487108
mtr-u.5	25488409	uncharacterized ATP-dependent helicase YprA
sly-u.5	101244477	uncharacterized LOC101244477
sot-r.1	102589199	uncharacterized ATP-dependent helicase YprA
nta-r.1	107812528	uncharacterized LOC107812528
nta-r.1	107788816	uncharacterized LOC107788816
osa-u.5	9271765	uncharacterized LOC9271765
zma-u.5	103633409	uncharacterized ATP-dependent helicase YprA
tae-r.2	123187996	uncharacterized ATP-dependent helicase YprA
hvu-r.1	123425373	uncharacterized ATP-dependent helicase YprA-like
sbi-r.1	8060664	uncharacterized ATP-dependent helicase YprA
bdi-r.1	100821154	uncharacterized ATP-dependent helicase YprA
cre-r.1	CHLRE_03g187700v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0036297 [list] [network] interstrand cross-link repair

(9 genes)

IGI

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

GO:0005524 [list] [network] ATP binding	(321 genes)	IEA
GO:0003676 [list] [network] nucleic acid binding	(3104 genes)	IEA

Protein

NP_001330594.1 [sequence] [blastp]
NP_001330595.1 [sequence] [blastp]
NP_196428.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto 2	(predict for NP_001330594.1)
nucl 7, cyto 3	(predict for NP_001330595.1)
nucl 7, cyto 3	(predict for NP_196428.2)

Subcellular
localization
TargetP

other 8	(predict for NP_001330594.1)
other 8	(predict for NP_001330595.1)
other 8	(predict for NP_196428.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT5G08110	ath-r.7 for AT5G08110	ath-m.9 for AT5G08110	ath-e.2 for AT5G08110	ath-m.4.bio for AT5G08110	ath-m.4.hor for AT5G08110	ath-m.4.lig for AT5G08110	ath-m.4.str for AT5G08110	ath-m.4.tis for AT5G08110	bra-r.6 for 103847576	ghi-r.1 for 107943381	ghi-r.1 for 107912104	cit-r.1 for 102626625	gma-u.5 for 100819522	vvi-u.5 for 100257644	ppo-u.5 for 7487108	mtr-u.5 for 25488409	sly-u.5 for 101244477	sot-r.1 for 102589199	nta-r.1 for 107812528	nta-r.1 for 107788816	osa-u.5 for 9271765	zma-u.5 for 103633409	tae-r.2 for 123187996	hvu-r.1 for 123425373	sbi-r.1 for 8060664	bdi-r.1 for 100821154	cre-r.1 for CHLRE_03g187700v5

Ortholog

Ortholog ID: 7705

Species

ath

bra

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

UBQ, helicase-c and DEAD-like helicase domain-containing protein