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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G59500   protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase 
 ath-r.7   AT5G59500   protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase 
 ath-m.9   AT5G59500   protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase 
 ath-e.2   AT5G59500   protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase 
 ath-m.4.bio   AT5G59500   protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase 
 ath-m.4.hor   AT5G59500   protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase 
 ath-m.4.lig   AT5G59500   protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase 
 ath-m.4.str   AT5G59500   protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase 
 ath-m.4.tis   AT5G59500   protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase 
 bra-r.6   103845374   uncharacterized LOC103845374 
 bna-r.1   BNAC09G34810D   uncharacterized BNAC09G34810D 
 bna-r.1   106420529   uncharacterized LOC106420529 
 ghi-r.1   107959130   uncharacterized LOC107959130 
 ghi-r.1   107906569   uncharacterized LOC107906569 
 cit-r.1   102607496   uncharacterized LOC102607496 
 gma-u.5   100814215   uncharacterized LOC100814215 
 gma-u.5   100781970   uncharacterized LOC100781970 
 vvi-u.5   100255385   uncharacterized LOC100255385 
 ppo-u.5   7485695   uncharacterized LOC7485695 
 ppo-u.5   7481526   uncharacterized LOC7481526 
 mtr-u.5   11410799   protein-S-isoprenylcysteine O-methyltransferase 
 sot-r.1   102605130   uncharacterized LOC102605130 
 nta-r.1   107789102   uncharacterized LOC107789102 
 nta-r.1   107793512   uncharacterized LOC107793512 
 cre-r.1   CHLRE_01g049750v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G59500 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G59500 (ath-u.5 coexpression data)

CoexMap"836069"


athAT5G59500 | Entrez gene ID : 836069      
Species ath bra bna ghi cit gma vvi ppo mtr sot nta cre hvu tae bdi osa zma sly sbi
Paralog 9 1 2 2 1 2 1 2 1 1 2 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045037 [list] [network] protein import into chloroplast stroma  (29 genes)  IDA  
GO CC
GO:0062091 [list] [network] Ycf2/FtsHi complex  (10 genes)  IPI  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO MF
Protein NP_001332653.1 [sequence] [blastp]
NP_200758.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  E.R. 4,  cyto_plas 3,  cyto 1,  extr 1,  vacu 1  (predict for NP_001332653.1)
plas 3,  cyto_plas 2,  E.R. 2,  chlo 1,  E.R._vacu 1,  cyto 1  (predict for NP_200758.1)
Subcellular
localization
TargetP
scret 8,  other 7  (predict for NP_001332653.1)
other 2  (predict for NP_200758.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G59500
ath-r.7
for
AT5G59500
ath-m.9
for
AT5G59500
ath-e.2
for
AT5G59500
ath-m.4.bio
for
AT5G59500
ath-m.4.hor
for
AT5G59500
ath-m.4.lig
for
AT5G59500
ath-m.4.str
for
AT5G59500
ath-m.4.tis
for
AT5G59500
bra-r.6
for
103845374
bna-r.1
for
BNAC09G34810D
bna-r.1
for
106420529
ghi-r.1
for
107959130
ghi-r.1
for
107906569
cit-r.1
for
102607496
gma-u.5
for
100814215
gma-u.5
for
100781970
vvi-u.5
for
100255385
ppo-u.5
for
7485695
ppo-u.5
for
7481526
mtr-u.5
for
11410799
sot-r.1
for
102605130
nta-r.1
for
107789102
nta-r.1
for
107793512
cre-r.1
for
CHLRE_01g049750v5


Ortholog ID: 12683
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sot nta nta cre
Symbol AT5G59500 LOC103845374 BNAC09G34810D LOC106420529 LOC107959130 LOC107906569 LOC102607496 LOC100814215 LOC100781970 LOC100255385 LOC7485695 LOC7481526 LOC11410799 LOC102605130 LOC107789102 LOC107793512 CHLRE_01g049750v5
Function* protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase uncharacterized LOC103845374 uncharacterized BNAC09G34810D uncharacterized LOC106420529 uncharacterized LOC107959130 uncharacterized LOC107906569 uncharacterized LOC102607496 uncharacterized LOC100814215 uncharacterized LOC100781970 uncharacterized LOC100255385 uncharacterized LOC7485695 uncharacterized LOC7481526 protein-S-isoprenylcysteine O-methyltransferase uncharacterized LOC102605130 uncharacterized LOC107789102 uncharacterized LOC107793512 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 9
bna00300 Lysine biosynthesis 5
bna00220 Arginine biosynthesis 4
bna00740 Riboflavin metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 5
bna00300 Lysine biosynthesis 4
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 7
ghi00300 Lysine biosynthesis 3
ghi00470 D-Amino acid metabolism 3
ghi00340 Histidine metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 7
ghi00300 Lysine biosynthesis 3
ghi00470 D-Amino acid metabolism 3
ghi00340 Histidine metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00061 Fatty acid biosynthesis 3
cit01212 Fatty acid metabolism 3
cit03010 Ribosome 3
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 2
gma00670 One carbon pool by folate 2
gma00790 Folate biosynthesis 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 3
vvi00061 Fatty acid biosynthesis 2
vvi00780 Biotin metabolism 2
vvi01212 Fatty acid metabolism 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 4
ppo03010 Ribosome 2
ppo00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo03010 Ribosome 2
ppo00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836069 103845374 106418573 106420529 107959130 107906569 102607496 100814215 100781970 100255385 7485695 7481526 11410799 102605130 107789102 107793512 5715725
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