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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G61400   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-r.7   AT5G61400   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.9   AT5G61400   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.2   AT5G61400   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   AT5G61400   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.hor   AT5G61400   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.lig   AT5G61400   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.str   AT5G61400   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   AT5G61400   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100853899   pentatricopeptide repeat-containing protein At5g61400 
 mtr-u.5   25488820   pentatricopeptide repeat-containing protein At5g61400 
 sly-u.5   101258868   pentatricopeptide repeat-containing protein At5g61400 
 osa-u.5   4347068   pentatricopeptide repeat-containing protein At5g61400 

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Top 50 coexpressed genes to AT5G61400 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G61400 (ath-u.5 coexpression data)

CoexMap"836261"


athAT5G61400 | Entrez gene ID : 836261    
Species ath vvi mtr sly osa sot hvu tae cit sbi ppo gma ghi zma cre bna nta bdi bra
Paralog 9 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_200948.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  chlo 1,  nucl 1,  mito 1,  E.R. 1,  pero 1,  chlo_mito 1  (predict for NP_200948.1)
Subcellular
localization
TargetP
mito 4  (predict for NP_200948.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G61400

.
ath-r.7
for
AT5G61400

.
ath-m.9
for
AT5G61400

.
ath-e.2
for
AT5G61400

.
ath-m.4.bio
for
AT5G61400

.
ath-m.4.hor
for
AT5G61400

.
ath-m.4.lig
for
AT5G61400

.
ath-m.4.str
for
AT5G61400

.
ath-m.4.tis
for
AT5G61400

.
vvi-u.5
for
100853899

.
mtr-u.5
for
25488820

.
sly-u.5
for
101258868

.
osa-u.5
for
4347068

.


Ortholog ID: 12479
Species ath sly osa bra vvi mtr tae tae hvu ghi ghi bna bna sot cit bdi nta
Symbol AT5G61400 LOC101258868 LOC4347068 LOC103837380 LOC100853899 LOC25488820 LOC123121679 LOC123112137 LOC123398337 LOC107886149 LOC107949813 LOC125577743 LOC106382205 LOC102582664 LOC107176758 LOC100822783 LOC107765663
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g61400 pentatricopeptide repeat-containing protein At5g61400 pentatricopeptide repeat-containing protein At5g61400 pentatricopeptide repeat-containing protein At5g61400 pentatricopeptide repeat-containing protein At5g61400 pentatricopeptide repeat-containing protein At5g61400 pentatricopeptide repeat-containing protein At5g61400 pentatricopeptide repeat-containing protein At5g61400-like pentatricopeptide repeat-containing protein At5g61400 pentatricopeptide repeat-containing protein At5g61400 pentatricopeptide repeat-containing protein At5g61400-like pentatricopeptide repeat-containing protein At5g61400 pentatricopeptide repeat-containing protein At5g61400-like pentatricopeptide repeat-containing protein At5g61400 pentatricopeptide repeat-containing protein At5g61400 uncharacterized LOC107765663
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836261 101258868 4347068 103837380 100853899 25488820 123121679 123112137 123398337 107886149 107949813 125577743 106382205 102582664 107176758 100822783 107765663
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