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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   TRM25   LOW protein: M-phase inducer phosphatase-like protein 
 ath-r.7   TRM25   LOW protein: M-phase inducer phosphatase-like protein 
 ath-m.9   TRM25   LOW protein: M-phase inducer phosphatase-like protein 
 ath-e.2   TRM25   LOW protein: M-phase inducer phosphatase-like protein 
 ath-m.4.bio   TRM25   LOW protein: M-phase inducer phosphatase-like protein 
 ath-m.4.hor   TRM25   LOW protein: M-phase inducer phosphatase-like protein 
 ath-m.4.lig   TRM25   LOW protein: M-phase inducer phosphatase-like protein 
 ath-m.4.str   TRM25   LOW protein: M-phase inducer phosphatase-like protein 
 ath-m.4.tis   TRM25   LOW protein: M-phase inducer phosphatase-like protein 
 bra-r.6   103874655   putative uncharacterized protein DDB_G0277255 
 bna-r.1   111210069   peptidyl-prolyl cis-trans isomerase CYP95 
 ghi-r.1   107890726   uncharacterized LOC107890726 
 ghi-r.1   107930189   uncharacterized LOC107930189 
 ghi-r.1   107947287   uncharacterized LOC107947287 
 cit-r.1   102631005   uncharacterized LOC102631005 
 gma-u.5   100795947   uncharacterized LOC100795947 
 gma-u.5   102662912   proteoglycan 4 
 gma-u.5   102659931   serine/arginine repetitive matrix protein 2 
 vvi-u.5   104882099   uncharacterized LOC104882099 
 mtr-u.5   11427611   uncharacterized LOC11427611 
 mtr-u.5   11417683   uncharacterized LOC11417683 
 sly-u.5   TRM25   TONNEAU1 recruiting motif 25 
 sot-r.1   102590616   protein LONGIFOLIA 1 
 nta-r.1   107825904   uncharacterized LOC107825904 
 osa-u.5   9268541   uncharacterized LOC9268541 
 zma-u.5   100502418   uncharacterized LOC100502418 
 tae-r.2   123080092   uncharacterized LOC123080092 
 hvu-r.1   123429137   verprolin 
 bdi-r.1   100834463   serine/arginine repetitive matrix protein 1 

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Top 50 coexpressed genes to TRM25 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TRM25 (ath-u.5 coexpression data)

CoexMap"836338"


athTRM25 | Entrez gene ID : 836338      
Species ath bra bna ghi cit gma vvi mtr sly sot nta osa zma tae hvu bdi cre sbi ppo
Paralog 9 1 1 3 1 3 1 2 1 1 1 1 1 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001332084.1 [sequence] [blastp]
NP_001332085.1 [sequence] [blastp]
NP_001332086.1 [sequence] [blastp]
NP_201023.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 2,  chlo 2  (predict for NP_001332084.1)
nucl 4,  cyto_nucl 4,  cyto 2,  chlo 2  (predict for NP_001332085.1)
nucl 4,  cyto_nucl 4,  cyto 2,  chlo 2  (predict for NP_001332086.1)
nucl 6,  cyto 2,  chlo 1,  plas 1,  pero 1  (predict for NP_201023.1)
Subcellular
localization
TargetP
chlo 3  (predict for NP_001332084.1)
chlo 3  (predict for NP_001332085.1)
chlo 3  (predict for NP_001332086.1)
other 7  (predict for NP_201023.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
TRM25
ath-r.7
for
TRM25
ath-m.9
for
TRM25
ath-e.2
for
TRM25
ath-m.4.bio
for
TRM25
ath-m.4.hor
for
TRM25
ath-m.4.lig
for
TRM25
ath-m.4.str
for
TRM25
ath-m.4.tis
for
TRM25
bra-r.6
for
103874655
bna-r.1
for
111210069
ghi-r.1
for
107890726
ghi-r.1
for
107930189
ghi-r.1
for
107947287
cit-r.1
for
102631005
gma-u.5
for
100795947
gma-u.5
for
102662912
gma-u.5
for
102659931
vvi-u.5
for
104882099
mtr-u.5
for
11427611
mtr-u.5
for
11417683
sly-u.5
for
TRM25
sot-r.1
for
102590616
nta-r.1
for
107825904
osa-u.5
for
9268541
zma-u.5
for
100502418
tae-r.2
for
123080092
hvu-r.1
for
123429137
bdi-r.1
for
100834463


Ortholog ID: 5603
Species ath bra bna bna ghi ghi ghi cit gma gma gma vvi mtr mtr sly sot nta osa zma tae hvu bdi
Symbol TRM25 LOC103874655 LOC111210069 BNAA06G21620D LOC107890726 LOC107930189 LOC107947287 LOC102631005 LOC100795947 LOC102662912 LOC102659931 LOC104882099 LOC11427611 LOC11417683 TRM25 LOC102590616 LOC107825904 LOC9268541 LOC100502418 LOC123187049 LOC123429137 LOC100834463
Function* LOW protein: M-phase inducer phosphatase-like protein putative uncharacterized protein DDB_G0277255 peptidyl-prolyl cis-trans isomerase CYP95 uncharacterized BNAA06G21620D uncharacterized LOC107890726 uncharacterized LOC107930189 uncharacterized LOC107947287 uncharacterized LOC102631005 uncharacterized LOC100795947 proteoglycan 4 serine/arginine repetitive matrix protein 2 uncharacterized LOC104882099 uncharacterized LOC11427611 uncharacterized LOC11417683 TONNEAU1 recruiting motif 25 protein LONGIFOLIA 1 uncharacterized LOC107825904 uncharacterized LOC9268541 uncharacterized LOC100502418 proteoglycan 4 verprolin serine/arginine repetitive matrix protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 2
vvi04517 IgSF CAM signaling 2
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 3
nta00310 Lysine degradation 2
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836338 103874655 111210069 106347797 107890726 107930189 107947287 102631005 100795947 102662912 102659931 104882099 11427611 11417683 101266997 102590616 107825904 9268541 100502418 123187049 123429137 100834463
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