[←][→] ath   At5g62170 Gene
functional annotation
Function   LOW protein: M-phase inducer phosphatase-like protein      
GO BP
GO:0015995 [list] [network] chlorophyll biosynthetic process  (56 genes)  IEA  
GO:0071695 [list] [network] anatomical structure maturation  (335 genes)  IEA  
GO:0009639 [list] [network] response to red or far red light  (365 genes)  IEA  
GO:0051301 [list] [network] cell division  (442 genes)  IEA  
GO:0007049 [list] [network] cell cycle  (473 genes)  IEA  
GO:0010015 [list] [network] root morphogenesis  (669 genes)  IEA  
GO:0048589 [list] [network] developmental growth  (1060 genes)  IEA  
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IEA  
GO:0009888 [list] [network] tissue development  (1806 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001332084.1  NP_001332085.1  NP_001332086.1  NP_201023.1 
BLAST NP_001332084.1  NP_001332085.1  NP_001332086.1  NP_201023.1 
Orthologous [Ortholog page] TRM24 (ath)  LOC7454464 (ppo)  LOC7482126 (ppo)  LOC9268541 (osa)  LOC11417683 (mtr)  LOC11427611 (mtr)  LOC100791539 (gma)  LOC100795947 (gma)  TRM25 (sly)  LOC102659931 (gma)  LOC102662912 (gma)  LOC103832778 (bra)  LOC103874655 (bra)  LOC123043234 (tae)  LOC123056954 (tae)  LOC123067549 (tae)  LOC123080092 (tae)  LOC123099517 (tae)  LOC123150573 (tae)  LOC123187049 (tae)  LOC123429137 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 2,  chlo 2  (predict for NP_001332084.1)
nucl 4,  cyto_nucl 4,  cyto 2,  chlo 2  (predict for NP_001332085.1)
nucl 4,  cyto_nucl 4,  cyto 2,  chlo 2  (predict for NP_001332086.1)
nucl 6,  cyto 2,  chlo 1,  plas 1,  pero 1  (predict for NP_201023.1)
Subcellular
localization
TargetP
chlo 3  (predict for NP_001332084.1)
chlo 3  (predict for NP_001332085.1)
chlo 3  (predict for NP_001332086.1)
other 7  (predict for NP_201023.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00904 Diterpenoid biosynthesis; Including: Gibberellin biosynthesis 2
Genes directly connected with TRM25 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.5 LNG1 longifolia1 [detail] 831411
5.4 JKD C2H2-like zinc finger protein [detail] 831919
5.3 AT5G24580 Heavy metal transport/detoxification superfamily protein [detail] 832529
4.2 GA20OX2 gibberellin 20 oxidase 2 [detail] 835256
Coexpressed
gene list		 [Coexpressed gene list for TRM25]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247457_at
247457_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247457_at
247457_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247457_at
247457_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836338      
Refseq ID (protein) NP_001332084.1 
NP_001332085.1 
NP_001332086.1 
NP_201023.1 


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