[←][→] ath   At5g62165 Gene
functional annotation
Function   AGAMOUS-like 42      
GO BP
GO:0080187 [list] [network] floral organ senescence  (6 genes)  IMP  
GO:0009838 [list] [network] abscission  (38 genes)  IMP  
GO:0009909 [list] [network] regulation of flower development  (171 genes)  IMP  
GO:0010150 [list] [network] leaf senescence  (195 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IEA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001032123.1  NP_001190593.1  NP_001190594.1  NP_001330218.1  NP_001330219.1  NP_001330220.1  NP_001330221.1  NP_001330222.1  NP_001330223.1  NP_001330224.1  NP_001330225.1  NP_001330226.1  NP_001330227.1  NP_001330228.1  NP_001330229.1  NP_568952.1  NP_851247.1 
BLAST NP_001032123.1  NP_001190593.1  NP_001190594.1  NP_001330218.1  NP_001330219.1  NP_001330220.1  NP_001330221.1  NP_001330222.1  NP_001330223.1  NP_001330224.1  NP_001330225.1  NP_001330226.1  NP_001330227.1  NP_001330228.1  NP_001330229.1  NP_568952.1  NP_851247.1 
Orthologous [Ortholog page] LOC780647 (tae)  LOC780690 (tae)  AGL20 (ath)  AGL14 (ath)  AGL19 (ath)  LOC4349237 (osa)  LOC7479245 (ppo)  LOC7482155 (ppo)  LOC7488925 (ppo)  LOC7494028 (ppo)  LOC11432102 (mtr)  LOC18094432 (ppo)  LOC25493640 (mtr)  LOC25500990 (mtr)  LOC25500991 (mtr)  LOC100037477 (gma)  LOC100125729 (tae)  LOC100782713 (gma)  LOC100784678 (gma)  LOC100800580 (gma)  LOC100805260 (gma)  LOC100807963 (gma)  LOC100816440 (gma)  LOC100818935 (gma)  LOC101244491 (sly)  LOC101249868 (sly)  LOC101250432 (sly)  FYFL (sly)  LOC101267688 (sly)  LOC103834274 (bra)  LOC103837402 (bra)  LOC103839919 (bra)  LOC103854984 (bra)  SOC1 (bra)  LOC103860605 (bra)  LOC103861349 (bra)  LOC103866224 (bra)  LOC103866913 (bra)  LOC103874654 (bra)  LOC123051047 (tae)  LOC123051061 (tae)  LOC123090346 (tae)  LOC123093767 (tae)  LOC123105942 (tae)  LOC123126988 (tae)  LOC123181529 (tae)  LOC123437294 (hvu)  LOC123449878 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001032123.1)
nucl 10  (predict for NP_001190593.1)
extr 5,  chlo 4,  nucl 1,  vacu 1  (predict for NP_001190594.1)
nucl 10  (predict for NP_001330218.1)
extr 5,  chlo 4,  nucl 1,  vacu 1  (predict for NP_001330219.1)
nucl 10  (predict for NP_001330220.1)
nucl 10  (predict for NP_001330221.1)
nucl 10  (predict for NP_001330222.1)
extr 5,  chlo 4,  nucl 1,  vacu 1  (predict for NP_001330223.1)
nucl 10  (predict for NP_001330224.1)
nucl 10  (predict for NP_001330225.1)
nucl 10  (predict for NP_001330226.1)
nucl 10  (predict for NP_001330227.1)
nucl 10  (predict for NP_001330228.1)
nucl 10  (predict for NP_001330229.1)
nucl 10  (predict for NP_568952.1)
nucl 10  (predict for NP_851247.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001032123.1)
other 8  (predict for NP_001190593.1)
chlo 9  (predict for NP_001190594.1)
other 8  (predict for NP_001330218.1)
chlo 9  (predict for NP_001330219.1)
other 8  (predict for NP_001330220.1)
other 8  (predict for NP_001330221.1)
other 8  (predict for NP_001330222.1)
chlo 9  (predict for NP_001330223.1)
other 8  (predict for NP_001330224.1)
other 8  (predict for NP_001330225.1)
other 8  (predict for NP_001330226.1)
other 8  (predict for NP_001330227.1)
other 8  (predict for NP_001330228.1)
other 8  (predict for NP_001330229.1)
other 8  (predict for NP_568952.1)
other 8  (predict for NP_851247.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AGL42 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.9 AGL8 AGAMOUS-like 8 [detail] 836212
5.5 AGL20 AGAMOUS-like 20 [detail] 819174
5.2 AGL14 AGAMOUS-like 14 [detail] 826795
5.2 AGL21 AGAMOUS-like 21 [detail] 829950
4.9 AT1G69170 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein [detail] 843248
Coexpressed
gene list		 [Coexpressed gene list for AGL42]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247469_at
247469_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247469_at
247469_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247469_at
247469_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836337      
Refseq ID (protein) NP_001032123.1 
NP_001190593.1 
NP_001190594.1 
NP_001330218.1 
NP_001330219.1 
NP_001330220.1 
NP_001330221.1 
NP_001330222.1 
NP_001330223.1 
NP_001330224.1 
NP_001330225.1 
NP_001330226.1 
NP_001330227.1 
NP_001330228.1 
NP_001330229.1 
NP_568952.1 
NP_851247.1 


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