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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G24620   EF hand calcium-binding protein family 
 ath-r.7   AT1G24620   EF hand calcium-binding protein family 
 ath-m.9   AT1G24620   EF hand calcium-binding protein family 
 ath-e.2   AT1G24620   EF hand calcium-binding protein family 
 ath-m.4.bio   AT1G24620   EF hand calcium-binding protein family 
 ath-m.4.hor   AT1G24620   EF hand calcium-binding protein family 
 ath-m.4.lig   AT1G24620   EF hand calcium-binding protein family 
 ath-m.4.str   AT1G24620   EF hand calcium-binding protein family 
 ath-m.4.tis   AT1G24620   EF hand calcium-binding protein family 
 gma-u.5   100813092   probable calcium-binding protein CML25 
 mtr-u.5   11413696   probable calcium-binding protein CML25 
 mtr-u.5   11439466   probable calcium-binding protein CML25 
 sly-u.5   101247547   probable calcium-binding protein CML25 

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Top 50 coexpressed genes to AT1G24620 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G24620 (ath-u.5 coexpression data)

CoexMap"839076"


athAT1G24620 | Entrez gene ID : 839076      
Species ath gma mtr sly sot hvu tae cit sbi ppo zma ghi cre vvi bna nta bdi bra osa
Paralog 9 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04626 [list] [network] Plant-pathogen interaction (216 genes)
GO BP
GO:0048767 [list] [network] root hair elongation  (80 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (158 genes)  IEA  
Protein NP_173866.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 2,  extr 2,  pero 2,  cyto_pero 2,  nucl 1  (predict for NP_173866.1)
Subcellular
localization
TargetP
other 6  (predict for NP_173866.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G24620

.
ath-r.7
for
AT1G24620

.
ath-m.9
for
AT1G24620

.
ath-e.2
for
AT1G24620

.
ath-m.4.bio
for
AT1G24620

.
ath-m.4.hor
for
AT1G24620

.
ath-m.4.lig
for
AT1G24620

.
ath-m.4.str
for
AT1G24620

.
ath-m.4.tis
for
AT1G24620

.
gma-u.5
for
100813092

.
mtr-u.5
for
11413696

.
mtr-u.5
for
11439466

.
sly-u.5
for
101247547

.


Ortholog ID: 5893
Species ath gma sly bra mtr ghi ghi sot cit nta
Symbol AT1G24620 LOC100813092 LOC101247547 LOC103839085 LOC11439466 LOC107935246 LOC107921182 LOC102603618 LOC102628300 LOC107825494
Function* EF hand calcium-binding protein family probable calcium-binding protein CML25 probable calcium-binding protein CML25 probable calcium-binding protein CML25 probable calcium-binding protein CML25 probable calcium-binding protein CML25 probable calcium-binding protein CML25 probable calcium-binding protein CML25 probable calcium-binding protein CML25 putative calcium-binding protein CML25
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
gma00592 alpha-Linolenic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 3
sly00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi04075 Plant hormone signal transduction 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi04075 Plant hormone signal transduction 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00020 Citrate cycle (TCA cycle) 2
cit01200 Carbon metabolism 2
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 4
nta04075 Plant hormone signal transduction 4
nta04145 Phagosome 2
nta04626 Plant-pathogen interaction 2
nta04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839076 100813092 101247547 103839085 11439466 107935246 107921182 102603618 102628300 107825494
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