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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   LNO1   Nuclear pore complex protein 
 ath-r.7   LNO1   Nuclear pore complex protein 
 ath-m.9   LNO1   Nuclear pore complex protein 
 ath-e.2   LNO1   Nuclear pore complex protein 
 ath-m.4.bio   LNO1   Nuclear pore complex protein 
 ath-m.4.hor   LNO1   Nuclear pore complex protein 
 ath-m.4.lig   LNO1   Nuclear pore complex protein 
 ath-m.4.str   LNO1   Nuclear pore complex protein 
 ath-m.4.tis   LNO1   Nuclear pore complex protein 
 bra-r.6   103832578   nuclear pore complex protein NUP214 
 bna-r.1   125577255   nuclear pore complex protein NUP214-like 
 bna-r.1   106360366   nuclear pore complex protein NUP214 
 bna-r.1   106360365   nuclear pore complex protein NUP214-like 
 ghi-r.1   107954716   nuclear pore complex protein NUP214 
 ghi-r.1   107952716   nuclear pore complex protein NUP214 
 cit-r.1   102629053   hypothetical protein 
 gma-u.5   100806517   nuclear pore complex protein NUP214 
 gma-u.5   100794048   nuclear pore complex protein NUP214 
 vvi-u.5   100245011   nuclear pore complex protein NUP214 
 ppo-u.5   7461338   nuclear pore complex protein NUP214 
 mtr-u.5   25484132   nuclear pore complex protein NUP214 
 sly-u.5   104645555   nuclear pore complex protein NUP214-like 
 sly-u.5   101268441   nuclear pore complex protein NUP214 
 sot-r.1   107060800   uncharacterized LOC107060800 
 sot-r.1   102587240   nuclear pore complex protein NUP214 
 nta-r.1   107819522   nuclear pore complex protein NUP214 
 nta-r.1   107802780   nuclear pore complex protein NUP214 
 osa-u.5   4344328   nuclear pore complex protein NUP214 
 zma-u.5   100276843   Nuclear pore complex protein NUP214 
 tae-r.2   123043644   nuclear pore complex protein NUP214 
 tae-r.2   123051435   nuclear pore complex protein NUP214 
 tae-r.2   123051518   nuclear pore complex protein NUP214 
 hvu-r.1   123424681   nuclear pore complex protein NUP214 
 sbi-r.1   8085294   nuclear pore complex protein NUP214 
 sbi-r.1   110433850   nuclear pore complex protein NUP214-like 
 sbi-r.1   8074468   nuclear pore complex protein NUP214 
 bdi-r.1   100824238   nuclear pore complex protein NUP214 
 cre-r.1   CHLRE_07g313500v5   uncharacterized protein 

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Top 50 coexpressed genes to LNO1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LNO1 (ath-u.5 coexpression data)

CoexMap"842002"


athLNO1 | Entrez gene ID : 842002      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 3 2 1 2 1 1 1 2 2 2 1 1 3 1 3 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03013 [list] [network] Nucleocytoplasmic transport (105 genes)
GO BP
GO:0010070 [list] [network] zygote asymmetric cell division  (4 genes)  IMP  
GO:0006405 [list] [network] RNA export from nucleus  (22 genes)  IEA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP NAS  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (5 genes)  IEA  
Protein NP_001117499.2 [sequence] [blastp]
NP_564694.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001117499.2)
nucl 9,  cyto_nucl 5  (predict for NP_564694.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001117499.2)
other 9  (predict for NP_564694.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
LNO1
ath-r.7
for
LNO1
ath-m.9
for
LNO1
ath-e.2
for
LNO1
ath-m.4.bio
for
LNO1
ath-m.4.hor
for
LNO1
ath-m.4.lig
for
LNO1
ath-m.4.str
for
LNO1
ath-m.4.tis
for
LNO1
bra-r.6
for
103832578
bna-r.1
for
125577255
bna-r.1
for
106360366
bna-r.1
for
106360365
ghi-r.1
for
107954716
ghi-r.1
for
107952716
cit-r.1
for
102629053
gma-u.5
for
100806517
gma-u.5
for
100794048
vvi-u.5
for
100245011
ppo-u.5
for
7461338
mtr-u.5
for
25484132
sly-u.5
for
104645555
sly-u.5
for
101268441
sot-r.1
for
107060800
sot-r.1
for
102587240
nta-r.1
for
107819522
nta-r.1
for
107802780
osa-u.5
for
4344328
zma-u.5
for
100276843
tae-r.2
for
123043644
tae-r.2
for
123051435
tae-r.2
for
123051518
hvu-r.1
for
123424681
sbi-r.1
for
8085294
sbi-r.1
for
110433850
sbi-r.1
for
8074468
bdi-r.1
for
100824238
cre-r.1
for
CHLRE_07g313500v5


Ortholog ID: 6733
Species ath bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sly sot sot nta nta osa zma tae tae tae hvu sbi sbi sbi bdi cre
Symbol LNO1 LOC103832578 LOC125577255 LOC106360366 LOC106360365 LOC107954716 LOC107952716 LOC102629053 LOC100806517 LOC100794048 LOC100245011 LOC7461338 LOC25484132 LOC104645555 LOC101268441 LOC107060800 LOC102587240 LOC107819522 LOC107802780 LOC4344328 LOC100276843 LOC123043644 LOC123051435 LOC123187382 LOC123424681 LOC8085294 LOC110433850 LOC8074468 LOC100824238 CHLRE_07g313500v5
Function* Nuclear pore complex protein nuclear pore complex protein NUP214 nuclear pore complex protein NUP214-like nuclear pore complex protein NUP214 nuclear pore complex protein NUP214-like nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 hypothetical protein nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214-like nuclear pore complex protein NUP214 uncharacterized LOC107060800 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 Nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 nuclear pore complex protein NUP214-like nuclear pore complex protein NUP214 nuclear pore complex protein NUP214 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
bra04120 Ubiquitin mediated proteolysis 2
bra04136 Autophagy - other 2
bra04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03082 ATP-dependent chromatin remodeling 2
bna03013 Nucleocytoplasmic transport 2
bna00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03082 ATP-dependent chromatin remodeling 2
bna03013 Nucleocytoplasmic transport 2
bna00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna03013 Nucleocytoplasmic transport 4
bna03082 ATP-dependent chromatin remodeling 2
bna00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 6
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03040 Spliceosome 4
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03040 Spliceosome 4
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 2
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842002 103832578 125577255 106360366 106360365 107954716 107952716 102629053 100806517 100794048 100245011 7461338 25484132 104645555 101268441 107060800 102587240 107819522 107802780 4344328 100276843 123043644 123051435 123187382 123424681 8085294 110433850 8074468 100824238 66053945
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