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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   MMP   matrix metalloproteinase 
 ath-r.7   MMP   matrix metalloproteinase 
 ath-m.9   MMP   matrix metalloproteinase 
 ath-e.2   MMP   matrix metalloproteinase 
 ath-m.4.bio   MMP   matrix metalloproteinase 
 ath-m.4.hor   MMP   matrix metalloproteinase 
 ath-m.4.lig   MMP   matrix metalloproteinase 
 ath-m.4.str   MMP   matrix metalloproteinase 
 ath-m.4.tis   MMP   matrix metalloproteinase 
 ath-u.5   AT1G24140   Matrixin family protein 
 gma-u.5   SMEP1   metalloproteinase 
 mtr-u.5   11406532   metalloendoproteinase 2-MMP 
 mtr-u.5   11410103   metalloendoproteinase 1 
 mtr-u.5   11409998   metalloendoproteinase 2-MMP 
 sly-u.5   MMP1   matrix metalloproteinases protein 3 
 sly-u.5   101251805   metalloendoproteinase 4-MMP 
 osa-u.5   4330680   metalloendoproteinase 2-MMP 
 osa-u.5   4349359   metalloendoproteinase 1-MMP 
 zma-u.5   100285384   metalloendoproteinase 1 
 zma-u.5   100274259   Metalloendoproteinase 5-MMP 
 zma-u.5   103637649   metalloendoproteinase 1-MMP 

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Top 50 coexpressed genes to MMP (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MMP (ath-u.5 coexpression data)

CoexMap"843353"


athMMP | Entrez gene ID : 843353      
Species ath gma mtr sly osa zma sot hvu tae cit sbi ppo ghi cre vvi bna nta bdi bra
Paralog 10 1 3 2 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080186 [list] [network] developmental vegetative growth  (11 genes)  IMP  
GO:1900056 [list] [network] negative regulation of leaf senescence  (22 genes)  IMP  
GO:0046686 [list] [network] response to cadmium ion  (81 genes)  IEP  
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (101 genes)  IMP  
GO:0009753 [list] [network] response to jasmonic acid  (202 genes)  IEP  
GO:0050832 [list] [network] defense response to fungus  (282 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (473 genes)  IEP  
GO CC
GO:0031012 [list] [network] extracellular matrix  (23 genes)  IEA  
GO:0048046 [list] [network] apoplast  (340 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO:0016020 [list] [network] membrane  (3740 genes)  TAS  
GO MF
GO:0004222 [list] [network] metalloendopeptidase activity  (35 genes)  IDA  
GO:0008237 [list] [network] metallopeptidase activity  (51 genes)  IDA  
Protein NP_177174.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  chlo 4,  E.R. 1  (predict for NP_177174.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_177174.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
MMP

.
ath-r.7
for
MMP

.
ath-m.9
for
MMP

.
ath-e.2
for
MMP

.
ath-m.4.bio
for
MMP

.
ath-m.4.hor
for
MMP

.
ath-m.4.lig
for
MMP

.
ath-m.4.str
for
MMP

.
ath-m.4.tis
for
MMP

.
ath-u.5
for
AT1G24140

.
gma-u.5
for
SMEP1

.
mtr-u.5
for
11406532

.
mtr-u.5
for
11410103

.
mtr-u.5
for
11409998

.
sly-u.5
for
MMP1

.
sly-u.5
for
101251805

.
osa-u.5
for
4330680

.
osa-u.5
for
4349359

.
zma-u.5
for
100285384

.
zma-u.5
for
100274259

.
zma-u.5
for
103637649

.


Ortholog ID: 384
Species ath ath gma sly sly osa zma zma bra bra mtr mtr tae tae hvu hvu ghi ghi cre sbi sbi sot cit bdi bdi nta
Symbol AT1G59970 MMP SMEP1 MMP2 MMP1 LOC9270797 LOC100274259 LOC103637649 LOC103831562 LOC103838570 LOC11442232 LOC11409998 LOC123099138 LOC123052586 LOC123413262 LOC123402518 LOC107915776 LOC107912216 CHLRE_14g609202v5 LOC8061483 LOC8058083 LOC102592086 LOC102616119 LOC100826984 LOC100844905 LOC107760134
Function* Matrixin family protein matrix metalloproteinase metalloproteinase matrix metalloproteinase 2 matrix metalloproteinases protein 3 metalloendoproteinase 2-MMP Metalloendoproteinase 5-MMP metalloendoproteinase 1-MMP metalloendoproteinase 2-MMP metalloendoproteinase 5-MMP metalloendoproteinase 4-MMP metalloendoproteinase 2-MMP metalloendoproteinase 4-MMP metalloendoproteinase 1-MMP-like metalloendoproteinase 2-MMP-like metalloendoproteinase 3-MMP-like metalloendoproteinase 5-MMP metalloendoproteinase 4-MMP uncharacterized protein metalloendoproteinase 2-MMP metalloendoproteinase 1-MMP metalloendoproteinase 3-MMP-like metalloendoproteinase 3-MMP metalloendoproteinase 3-MMP metalloendoproteinase 1-MMP metalloendoproteinase 1-MMP-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00561 Glycerolipid metabolism 2
ath00564 Glycerophospholipid metabolism 2
ath02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 4
sly04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 4
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
sot00360 Phenylalanine metabolism 2
sot00940 Phenylpropanoid biosynthesis 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 3
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00908 Zeatin biosynthesis 4
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842291 843353 547880 101260125 101055590 9270797 100274259 103637649 103831562 103838570 11442232 11409998 123099138 123052586 123413262 123402518 107915776 107912216 5726898 8061483 8058083 102592086 102616119 100826984 100844905 107760134
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