ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	103637649	metalloendoproteinase 1-MMP
zma-r.6	103637649	metalloendoproteinase 1-MMP
zma-u.5	100285384	metalloendoproteinase 1
zma-u.5	100274259	Metalloendoproteinase 5-MMP
sbi-r.1	8068601	metalloendoproteinase 2-MMP
sbi-r.1	8061483	metalloendoproteinase 2-MMP
sbi-r.1	8058083	metalloendoproteinase 1-MMP
tae-r.2	123149168	metalloendoproteinase 2-MMP
tae-r.2	123157482	metalloendoproteinase 2-MMP
tae-r.2	123130985	metalloendoproteinase 3-MMP
hvu-r.1	123449985	metalloendoproteinase 1-MMP-like
hvu-r.1	123439670	metalloendoproteinase 1-MMP-like
hvu-r.1	123413262	metalloendoproteinase 2-MMP-like
bdi-r.1	100840393	metalloendoproteinase 4-MMP
bdi-r.1	100828046	metalloendoproteinase 3-MMP
bdi-r.1	100826984	metalloendoproteinase 3-MMP
ath-u.5	MMP	matrix metalloproteinase
gma-u.5	100794001	metalloendoproteinase 4-MMP
sly-u.5	MMP2	matrix metalloproteinase 2
sly-u.5	101251805	metalloendoproteinase 4-MMP
bra-r.6	103840707	metalloendoproteinase 3-MMP
bra-r.6	103860876	metalloendoproteinase 1-MMP
ppo-u.5	7473919	metalloendoproteinase 1
ppo-u.5	7455257	metalloendoproteinase 2-MMP
mtr-u.5	11411133	metalloendoproteinase 1
mtr-u.5	11410103	metalloendoproteinase 1
mtr-u.5	11442232	metalloendoproteinase 4-MMP
ghi-r.1	107912216	metalloendoproteinase 4-MMP
ghi-r.1	107911886	metalloendoproteinase 4-MMP
ghi-r.1	107911788	metalloendoproteinase 1
bna-r.1	106381800	metalloendoproteinase 3-MMP
bna-r.1	111199279	metalloendoproteinase 2-MMP-like
bna-r.1	125576314	metalloendoproteinase 2-MMP-like
sot-r.1	102591586	metalloendoproteinase 4-MMP
sot-r.1	102592086	metalloendoproteinase 3-MMP-like
cit-r.1	102616119	metalloendoproteinase 3-MMP
cit-r.1	102627001	metalloendoproteinase 3-MMP-like
nta-r.1	107782587	metalloendoproteinase 4-MMP-like
nta-r.1	107776901	metalloendoproteinase 1-MMP-like
cre-r.1	CHLRE_14g609202v5	uncharacterized protein

Top 50 coexpressed genes to 103637649 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103637649 (zma-u.5 coexpression data)

CoexMap"103637649"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0030574 [list] [network] collagen catabolic process	(3 genes)	IEA
GO:0030198 [list] [network] extracellular matrix organization	(13 genes)	IEA
GO:0006508 [list] [network] proteolysis	(984 genes)	IEA

GO CC

GO:0031012 [list] [network] extracellular matrix

(3 genes)

IEA

GO MF

GO:0004222 [list] [network] metalloendopeptidase activity	(53 genes)	IEA
GO:0008270 [list] [network] zinc ion binding	(807 genes)	IEA

Protein

XP_008658321.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, cyto_plas 4, E.R. 1, chlo 1, vacu 1, pero 1

(predict for XP_008658321.1)

Subcellular
localization
TargetP

scret 8

(predict for XP_008658321.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103637649	zma-r.6 for 103637649	zma-u.5 for 100285384	zma-u.5 for 100274259	sbi-r.1 for 8068601	sbi-r.1 for 8061483	sbi-r.1 for 8058083	tae-r.2 for 123149168	tae-r.2 for 123157482	tae-r.2 for 123130985	hvu-r.1 for 123449985	hvu-r.1 for 123439670	hvu-r.1 for 123413262	bdi-r.1 for 100840393	bdi-r.1 for 100828046	bdi-r.1 for 100826984	ath-u.5 for MMP	gma-u.5 for 100794001	sly-u.5 for MMP2	sly-u.5 for 101251805	bra-r.6 for 103840707	bra-r.6 for 103860876	ppo-u.5 for 7473919	ppo-u.5 for 7455257	mtr-u.5 for 11411133	mtr-u.5 for 11410103	mtr-u.5 for 11442232	ghi-r.1 for 107912216	ghi-r.1 for 107911886	ghi-r.1 for 107911788	bna-r.1 for 106381800	bna-r.1 for 111199279	bna-r.1 for 125576314	sot-r.1 for 102591586	sot-r.1 for 102592086	cit-r.1 for 102616119	cit-r.1 for 102627001	nta-r.1 for 107782587	nta-r.1 for 107776901	cre-r.1 for CHLRE_14g609202v5

Ortholog

Ortholog ID: 384

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

ppo

mtr

ghi

sot

cit

nta

cre

Symbol

MMP

SMEP1

MMP2

MMP1

Function^*

metalloendoproteinase 1-MMP

metalloendoproteinase 1

Metalloendoproteinase 5-MMP

metalloendoproteinase 2-MMP

metalloendoproteinase 1-MMP

metalloendoproteinase 2-MMP

metalloendoproteinase 4-MMP

metalloendoproteinase 1-MMP-like

metalloendoproteinase 2-MMP-like

metalloendoproteinase 3-MMP-like

metalloendoproteinase 3-MMP

metalloendoproteinase 1-MMP

matrix metalloproteinase

Matrixin family protein

metalloproteinase

metalloendoproteinase 2-MMP

matrix metalloproteinase 2

matrix metalloproteinases protein 3

metalloendoproteinase 2-MMP

metalloendoproteinase 5-MMP

metalloendoproteinase 1

metalloendoproteinase 4-MMP

metalloendoproteinase 1

metalloendoproteinase 2-MMP

metalloendoproteinase 4-MMP

metalloendoproteinase 5-MMP

metalloendoproteinase 2-MMP-like

metalloendoproteinase 4-MMP

metalloendoproteinase 3-MMP-like

metalloendoproteinase 3-MMP

metalloendoproteinase 1-MMP-like

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01250	Biosynthesis of nucleotide sugars	3
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00908	Zeatin biosynthesis	4
bdi04075	Plant hormone signal transduction	2
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00561	Glycerolipid metabolism	2
ath00564	Glycerophospholipid metabolism	2
ath02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	4
sly04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	4
sly04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00561	Glycerolipid metabolism	3
bra00564	Glycerophospholipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	5
ghi04016	MAPK signaling pathway - plant	4
ghi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	2
sot00360	Phenylalanine metabolism	2
sot00940	Phenylpropanoid biosynthesis	2
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	3
cit04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	2
nta04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

103637649

100285384

100274259

8068601

8061483

8058083

9270797

123106099

123099138

123052586

123439670

123413262

123402518

100828046

100826984

100844905

843353

839026

842291

547880

100782143

101260125

101055590

103831562

103830895

103838570

18104342

11442232

25494610

11409998

107912216

107915776

107945266

102591586

102592086

102616119

107776901

107760134

5726898

The preparation time of this page was 0.1 [sec].


Species	zma	sbi	tae	hvu	bdi	ath	gma	sly	bra	ppo	mtr	ghi	bna	sot	cit	nta	cre	vvi	osa
Paralog	4	3	3	3	3	1	1	2	2	2	3	3	3	2	2	2	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103637649 (zma-u.5 coexpression data)

Top 50 enrichment test to 103637649 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**