Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G79990   coatomer subunit beta-2 
 ath-r.7   AT1G79990   coatomer subunit beta-2 
 ath-e.2   AT1G79990   coatomer subunit beta-2 
 ath-m.4.bio   AT1G79990   coatomer subunit beta-2 
 ath-m.4.hor   AT1G79990   coatomer subunit beta-2 
 ath-m.4.lig   AT1G79990   coatomer subunit beta-2 
 ath-m.4.str   AT1G79990   coatomer subunit beta-2 
 ath-m.4.tis   AT1G79990   coatomer subunit beta-2 
 ath-u.5   AT3G15980   Coatomer, beta' subunit 
 ath-u.5   AT1G52360   Coatomer, beta' subunit 
 gma-u.5   106794271   coatomer subunit beta'-2 
 gma-u.5   100818132   coatomer subunit beta'-2 
 gma-u.5   100797508   coatomer subunit beta'-2 
 vvi-u.5   100247411   coatomer subunit beta'-1 
 vvi-u.5   100256305   coatomer subunit beta'-2 
 ppo-u.5   7472972   coatomer subunit beta'-1 
 ppo-u.5   7483508   coatomer subunit beta'-2 
 mtr-u.5   25487932   coatomer subunit beta'-3 
 mtr-u.5   25491385   coatomer subunit beta'-2 
 mtr-u.5   25487934   coatomer subunit beta'-2 
 sly-u.5   101247999   coatomer subunit beta'-2 
 sly-u.5   101264409   coatomer subunit beta'-1 
 sly-u.5   101247229   coatomer subunit beta'-2 
 osa-u.5   4328694   coatomer subunit beta'-2-like 
 osa-u.5   4340097   coatomer subunit beta'-1-like 
 zma-u.5   103654814   coatomer subunit beta'-2-like 
 zma-u.5   100383977   uncharacterized LOC100383977 
 zma-u.5   100383405   putative coatomer beta subunit family protein 

close


Top 50 coexpressed genes to AT1G79990 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT1G79990 (ath-u.5 coexpression data)

CoexMap"844339"


athAT1G79990 | Entrez gene ID : 844339      
Species ath gma vvi ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 10 3 2 2 3 3 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0005198 [list] [network] structural molecule activity  (175 genes)  IEA  
Protein NP_001154478.1 [sequence] [blastp]
NP_001154480.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  nucl 2,  cyto 2,  mito 2,  cyto_nucl 2,  chlo_mito 2  (predict for NP_001154478.1)
chlo 3,  nucl 2,  cyto 2,  cyto_nucl 2,  chlo_mito 2  (predict for NP_001154480.1)
Subcellular
localization
TargetP
mito 6,  other 4  (predict for NP_001154478.1)
mito 6,  other 4  (predict for NP_001154480.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G79990

.
ath-r.7
for
AT1G79990

.
ath-e.2
for
AT1G79990

.
ath-m.4.bio
for
AT1G79990

.
ath-m.4.hor
for
AT1G79990

.
ath-m.4.lig
for
AT1G79990

.
ath-m.4.str
for
AT1G79990

.
ath-m.4.tis
for
AT1G79990

.
ath-u.5
for
AT3G15980

.
ath-u.5
for
AT1G52360

.
gma-u.5
for
106794271

.
gma-u.5
for
100818132

.
gma-u.5
for
100797508

.
vvi-u.5
for
100247411

.
vvi-u.5
for
100256305

.
ppo-u.5
for
7472972

.
ppo-u.5
for
7483508

.
mtr-u.5
for
25487932

.
mtr-u.5
for
25491385

.
mtr-u.5
for
25487934

.
sly-u.5
for
101247999

.
sly-u.5
for
101264409

.
sly-u.5
for
101247229

.
osa-u.5
for
4328694

.
osa-u.5
for
4340097

.
zma-u.5
for
103654814

.
zma-u.5
for
100383977

.
zma-u.5
for
100383405

.


Ortholog ID: 971
Species ath ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr mtr hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT1G79990 AT3G15980 LOC106794271 LOC100807969 LOC101264409 LOC101248561 LOC4340097 LOC100216577 LOC103638095 LOC103840347 LOC103868507 LOC100256305 LOC7472972 LOC7483508 LOC25487932 LOC25487934 LOC123412026 LOC123404728 LOC107944309 LOC107951998 LOC106404097 LOC106405924 CHLRE_02g118500v5 LOC8082944 LOC8065049 LOC102604581 LOC102603830 LOC102622607 LOC102622899 LOC100823641 LOC100837884 LOC107788062 LOC107771428
Function* coatomer subunit beta-2 Coatomer, beta' subunit coatomer subunit beta'-2 coatomer subunit beta'-2 coatomer subunit beta'-1 coatomer subunit beta'-2 coatomer subunit beta'-1-like uncharacterized LOC100216577 coatomer subunit beta'-1 coatomer subunit beta'-3 coatomer subunit beta'-2 coatomer subunit beta'-2 coatomer subunit beta'-1 coatomer subunit beta'-2 coatomer subunit beta'-3 coatomer subunit beta'-2 coatomer subunit beta'-1 coatomer subunit beta'-2 coatomer subunit beta'-2 coatomer subunit beta'-2 coatomer subunit beta'-3-like coatomer subunit beta'-2 uncharacterized protein coatomer subunit beta'-2 coatomer subunit beta'-2 coatomer subunit beta'-2-like coatomer subunit beta'-1-like coatomer subunit beta'-3-like coatomer subunit beta'-2-like coatomer subunit beta'-1 coatomer subunit beta'-2 coatomer subunit beta'-1 coatomer subunit beta'-2
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath04144 Endocytosis 2
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 4
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 3
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
gma01230 Biosynthesis of amino acids 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 5
zma04144 Endocytosis 2
zma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 3
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
bra00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 4
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi00902 Monoterpenoid biosynthesis 2
vvi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 4
ppo04144 Endocytosis 4
ppo05100 Bacterial invasion of epithelial cells 3
ppo03015 mRNA surveillance pathway 2
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 3
mtr04144 Endocytosis 3
mtr05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 4
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04142 Lysosome 2
hvu05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
hvu04142 Lysosome 2
hvu04144 Endocytosis 2
hvu05100 Bacterial invasion of epithelial cells 2
hvu00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
ghi00100 Steroid biosynthesis 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 7
bna03060 Protein export 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 5
sot04141 Protein processing in endoplasmic reticulum 4
sot04142 Lysosome 3
sot05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 6
cit04626 Plant-pathogen interaction 3
cit00071 Fatty acid degradation 3
cit00350 Tyrosine metabolism 3
cit00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit04144 Endocytosis 3
cit05100 Bacterial invasion of epithelial cells 2
cit04142 Lysosome 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844339 820842 106794271 100807969 101264409 101248561 4340097 100216577 103638095 103840347 103868507 100256305 7472972 7483508 25487932 25487934 123412026 123404728 107944309 107951998 106404097 106405924 5727962 8082944 8065049 102604581 102603830 102622607 102622899 100823641 100837884 107788062 107771428
The preparation time of this page was 0.2 [sec].