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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103870311   protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 1 
 bra-r.6   103845999   protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 1 
 bra-r.6   103855676   protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 2 
 bna-r.1   106426317   protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 2-like 
 bna-r.1   BNAA03G55380D   protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 2 
 ath-u.5   AT3G11770   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-u.5   AT5G06450   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 

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Top 50 coexpressed genes to 103870311 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103870311 (bra-r.6 coexpression data)

CoexMap"103870311"


braLOC103870311 | Entrez gene ID : 103870311    
Species bra bna ath osa sot sly cit ppo ghi bdi sbi gma mtr tae hvu vvi zma cre nta
Paralog 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (7940 genes)  IEA  
GO MF
GO:0008408 [list] [network] 3'-5' exonuclease activity  (84 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (5846 genes)  IEA  
Protein XP_009146683.2 [sequence] [blastp]
XP_009146684.1 [sequence] [blastp]
XP_009146685.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  E.R._vacu 1  (predict for XP_009146683.2)
cysk 5,  cyto 4  (predict for XP_009146684.1)
cysk 5,  cyto 4  (predict for XP_009146685.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_009146683.2)
other 8  (predict for XP_009146684.1)
other 8  (predict for XP_009146685.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103870311
bra-r.6
for
103845999
bra-r.6
for
103855676
bna-r.1
for
106426317
bna-r.1
for
BNAA03G55380D
ath-u.5
for
AT3G11770
ath-u.5
for
AT5G06450


Ortholog ID: 14017
Species bra bra bra bna bna ath ath
Symbol LOC103870311 LOC103845999 LOC103855676 LOC106452497 LOC106411830 AT3G11770 AT5G06450
Function* protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 1 protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 1 protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 2 protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 1-like protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
bra04145 Phagosome 5
bra04130 SNARE interactions in vesicular transport 3
bra04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
bna00190 Oxidative phosphorylation 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00040 Pentose and glucuronate interconversions 2
bna00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
bna00010 Glycolysis / Gluconeogenesis 2
bna00040 Pentose and glucuronate interconversions 2
bna00053 Ascorbate and aldarate metabolism 2
bna00561 Glycerolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103870311 103845999 103855676 106452497 106411830 820351 830533
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