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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G06450   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-r.7   AT5G06450   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-e.2   AT5G06450   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-u.5   AT3G11770   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 bra-r.6   103845999   protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 1 
 bra-r.6   103855676   protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 2 
 bra-r.6   103870311   protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 1 
 bna-r.1   106426317   protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 2-like 
 bna-r.1   BNAA03G55380D   protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 2 

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Top 50 coexpressed genes to AT5G06450 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G06450 (ath-u.5 coexpression data)

CoexMap"830533"


athAT5G06450 | Entrez gene ID : 830533      
Species ath bra bna cre vvi ppo mtr hvu tae osa gma zma sly ghi cit sbi nta bdi sot
Paralog 4 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:2000630 [list] [network] positive regulation of miRNA metabolic process  (3 genes)  IMP  
GO CC
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0008310 [list] [network] single-stranded DNA 3'-5' DNA exonuclease activity  (2 genes)  IDA  
GO:1905172 [list] [network] RISC complex binding  (2 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_196263.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  mito 2,  chlo 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_196263.1)
Subcellular
localization
TargetP
other 9  (predict for NP_196263.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G06450
ath-r.7
for
AT5G06450
ath-e.2
for
AT5G06450
ath-u.5
for
AT3G11770
bra-r.6
for
103845999
bra-r.6
for
103855676
bra-r.6
for
103870311
bna-r.1
for
106426317
bna-r.1
for
BNAA03G55380D


Ortholog ID: 14017
Species ath ath bra bra bra bna bna
Symbol AT5G06450 AT3G11770 LOC103845999 LOC103855676 LOC103870311 LOC106452497 LOC106411830
Function* Polynucleotidyl transferase, ribonuclease H-like superfamily protein Polynucleotidyl transferase, ribonuclease H-like superfamily protein protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 1 protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 2 protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 1 protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 1-like protein RISC-INTERACTING CLEARING 3'-5' EXORIBONUCLEASE 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
bra04145 Phagosome 5
bra04130 SNARE interactions in vesicular transport 3
bra04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
bna00190 Oxidative phosphorylation 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00040 Pentose and glucuronate interconversions 2
bna00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
bna00010 Glycolysis / Gluconeogenesis 2
bna00040 Pentose and glucuronate interconversions 2
bna00053 Ascorbate and aldarate metabolism 2
bna00561 Glycerolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830533 820351 103845999 103855676 103870311 106452497 106411830
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