ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-m.5	100796161	protein phosphatase 2C 37
gma-u.5	100796161	protein phosphatase 2C 37
gma-r.7	100796161	protein phosphatase 2C 37
gma-u.5	100818568	probable protein phosphatase 2C 8
gma-u.5	100813248	probable protein phosphatase 2C 8
gma-u.5	100807302	protein phosphatase 2C 37
mtr-u.5	11435594	protein phosphatase 2C 37
mtr-u.5	25482353	protein phosphatase 2C 51
mtr-u.5	25489354	probable protein phosphatase 2C 24
ppo-u.5	7467562	protein phosphatase 2C 37
ppo-u.5	7481518	probable protein phosphatase 2C 24
ath-u.5	HAI3	highly ABA-induced PP2C protein 3
ath-u.5	PP2CA	protein phosphatase 2CA
ath-u.5	HAI1	PP2C protein (Clade A protein phosphatases type 2C)
bra-r.6	103843457	protein phosphatase 2C 3
bra-r.6	103843946	protein phosphatase 2C 3
bra-r.6	103845336	probable protein phosphatase 2C 78
vvi-u.5	100267287	protein phosphatase 2C 51
vvi-u.5	100255251	probable protein phosphatase 2C 24
ghi-r.1	107947252	probable protein phosphatase 2C 8
ghi-r.1	107937605	protein phosphatase 2C 51
bna-r.1	125591349	protein phosphatase 2C 3-like
bna-r.1	111215747	protein phosphatase 2C 37
cit-r.1	102611031	probable protein phosphatase 2C 24
cit-r.1	102621444	protein phosphatase 2C 51-like
cit-r.1	102629888	protein phosphatase 2C 37
sly-u.5	PP2C-2	protein phosphatase 2C AHG3 homolog
sly-u.5	101244003	probable protein phosphatase 2C 24
sly-u.5	101248778	protein phosphatase 2C 37
sot-r.1	102582408	probable protein phosphatase 2C 51
sot-r.1	102599348	protein phosphatase 2C 37-like
nta-r.1	107807989	putative protein phosphatase 2C 24
nta-r.1	107803211	protein phosphatase 2C 37-like
osa-u.5	PP2C68	probable protein phosphatase 2C 68
osa-u.5	4339671	protein phosphatase 2C 51-like
osa-u.5	4332374	probable protein phosphatase 2C 30
zma-u.5	100279578	uncharacterized LOC100279578
zma-u.5	100273512	probable protein phosphatase 2C 8
zma-u.5	100282657	uncharacterized LOC100282657
tae-r.2	123071396	probable protein phosphatase 2C 9
tae-r.2	123078700	probable protein phosphatase 2C 8
hvu-r.1	123444003	probable protein phosphatase 2C 8
hvu-r.1	123444909	probable protein phosphatase 2C 9
hvu-r.1	123420258	protein phosphatase 2C 51-like
sbi-r.1	8058260	probable protein phosphatase 2C 8
sbi-r.1	8058897	probable protein phosphatase 2C 9
sbi-r.1	8054565	probable protein phosphatase 2C 68
bdi-r.1	100846587	probable protein phosphatase 2C 9
bdi-r.1	100838998	probable protein phosphatase 2C 8
cre-r.1	CHLRE_03g211073v5	uncharacterized protein

Top 50 coexpressed genes to 100796161 (gma-m.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100796161 (gma-m.5 coexpression data)

CoexMap"100796161"

[Cytoscape]

Annotation

functional annotation

KEGG

gmx04016 [list] [network] MAPK signaling pathway - plant (304 genes)

gmx04075 [list] [network] Plant hormone signal transduction (888 genes)

GO BP

GO:0035970 [list] [network] peptidyl-threonine dephosphorylation

(109 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(5531 genes)

IEA

GO MF

GO:0004722 [list] [network] protein serine/threonine phosphatase activity	(199 genes)	IEA
GO:0043169 [list] [network] cation binding	(3206 genes)	IEA

Protein

XP_003552788.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cyto_nucl 4, cyto 3

(predict for XP_003552788.1)

Subcellular
localization
TargetP

other 6, chlo 5

(predict for XP_003552788.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-m.5 for 100796161	gma-u.5 for 100796161	gma-r.7 for 100796161	gma-u.5 for 100818568	gma-u.5 for 100813248	gma-u.5 for 100807302	mtr-u.5 for 11435594	mtr-u.5 for 25482353	mtr-u.5 for 25489354	ppo-u.5 for 7467562	ppo-u.5 for 7481518	ath-u.5 for HAI3	ath-u.5 for PP2CA	ath-u.5 for HAI1	bra-r.6 for 103843457	bra-r.6 for 103843946	bra-r.6 for 103845336	vvi-u.5 for 100267287	vvi-u.5 for 100255251	ghi-r.1 for 107947252	ghi-r.1 for 107937605	bna-r.1 for 125591349	bna-r.1 for 111215747	cit-r.1 for 102611031	cit-r.1 for 102621444	cit-r.1 for 102629888	sly-u.5 for PP2C-2	sly-u.5 for 101244003	sly-u.5 for 101248778	sot-r.1 for 102582408	sot-r.1 for 102599348	nta-r.1 for 107807989	nta-r.1 for 107803211	osa-u.5 for PP2C68	osa-u.5 for 4339671	osa-u.5 for 4332374	zma-u.5 for 100279578	zma-u.5 for 100273512	zma-u.5 for 100282657	tae-r.2 for 123071396	tae-r.2 for 123078700	hvu-r.1 for 123444003	hvu-r.1 for 123444909	hvu-r.1 for 123420258	sbi-r.1 for 8058260	sbi-r.1 for 8058897	sbi-r.1 for 8054565	bdi-r.1 for 100846587	bdi-r.1 for 100838998	cre-r.1 for CHLRE_03g211073v5

Ortholog

Ortholog ID: 501

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

HAI3

PP2CA

HAI2

Function^*

protein phosphatase 2C 37

probable protein phosphatase 2C 51

protein phosphatase 2C 37

protein phosphatase 2C 51

probable protein phosphatase 2C 8

protein phosphatase 2C 37

protein phosphatase 2C 51

protein phosphatase 2C 37

highly ABA-induced PP2C protein 3

protein phosphatase 2CA

highly ABA-induced PP2C protein 2

protein phosphatase 2C 3

protein phosphatase 2C 37

protein phosphatase 2C 51

probable protein phosphatase 2C 24

protein phosphatase 2C 51

probable protein phosphatase 2C 24

protein phosphatase 2C 3-like

protein phosphatase 2C 37

probable protein phosphatase 2C 78

probable protein phosphatase 2C 24

protein phosphatase 2C 51-like

protein phosphatase 2C 37

protein phosphatase 2C 51-like

probable protein phosphatase 2C 51

probable protein phosphatase 2C 24

protein phosphatase 2C 37-like

probable protein phosphatase 2C 30

probable protein phosphatase 2C 9

probable protein phosphatase 2C 49

uncharacterized LOC100279578

uncharacterized LOC100282657

uncharacterized LOC103636504

probable protein phosphatase 2C 8

probable protein phosphatase 2C 68

probable protein phosphatase 2C 8

protein phosphatase 2C 51-like

probable protein phosphatase 2C 68

probable protein phosphatase 2C 9

probable protein phosphatase 2C 68

uncharacterized LOC110432288

probable protein phosphatase 2C 8

probable protein phosphatase 2C 68

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	4
gma04075	Plant hormone signal transduction	4
gma00500	Starch and sucrose metabolism	2
gma02010	ABC transporters	2
gma04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	3
gma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	5
gma04075	Plant hormone signal transduction	5
gma00500	Starch and sucrose metabolism	2
gma02010	ABC transporters	2
gma04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	6
mtr04016	MAPK signaling pathway - plant	5
mtr00562	Inositol phosphate metabolism	2
mtr04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	3
mtr04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	7
ppo04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	4
ppo04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	8
ppo04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	3
ath04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	8
ath04016	MAPK signaling pathway - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	6
ath04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	4
bra04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	5
bra04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	4
vvi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	4
vvi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	3
ghi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	4
ghi04075	Plant hormone signal transduction	4
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	6
bna04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	4
bna04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	6
bna04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	5
cit04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	4
cit04075	Plant hormone signal transduction	4
cit00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	7
cit04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	6
sly04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	3
sly04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	6
sot04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	7
sot04016	MAPK signaling pathway - plant	6
sot00564	Glycerophospholipid metabolism	2
sot00565	Ether lipid metabolism	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	8
nta04016	MAPK signaling pathway - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	8
nta04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	8
nta04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	8
osa04016	MAPK signaling pathway - plant	6
osa00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	7
osa04016	MAPK signaling pathway - plant	6
osa00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	8
osa04016	MAPK signaling pathway - plant	6
osa00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	11
zma04016	MAPK signaling pathway - plant	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	8
zma04016	MAPK signaling pathway - plant	7
zma00906	Carotenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	9
zma04075	Plant hormone signal transduction	9
zma00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	12
tae04075	Plant hormone signal transduction	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	9
tae04075	Plant hormone signal transduction	9
tae00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	12
tae04075	Plant hormone signal transduction	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04016	MAPK signaling pathway - plant	2
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	5
hvu00310	Lysine degradation	3
hvu04016	MAPK signaling pathway - plant	3
hvu00010	Glycolysis / Gluconeogenesis	2
hvu00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	8
sbi04016	MAPK signaling pathway - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	5
sbi04075	Plant hormone signal transduction	5
sbi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	4
sbi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	5
bdi04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	6
bdi04016	MAPK signaling pathway - plant	5

Expression

Expression pattern

Entrez Gene ID^*

100796161

100807235

100781388

11435594

25482353

11436220

7467562

7489826

7458124

817487

820314

837255

103843457

103843946

103845976

100267287

100255251

107937605

107906580

121215534

125591349

106452531

106433287

102611031

102621444

102629888

101248778

101249794

102582408

102601835

107803211

107779894

107760683

4332374

4327465

9270549

100279578

100282657

103636504

123078700

123103505

123111722

123444003

123420258

123395405

8058897

8054565

110432288

100838998

100823313

5724961

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	3	2	3	3	2	2	2	3	3	2	2	3	3	2	3	3	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100796161 (gma-m.5 coexpression data)

Top 50 enrichment test to 100796161 (gma-m.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**