ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_03g211073v5	uncharacterized protein
ath-u.5	HAI3	highly ABA-induced PP2C protein 3
ath-u.5	PP2CA	protein phosphatase 2CA
ath-u.5	HAI1	PP2C protein (Clade A protein phosphatases type 2C)
gma-u.5	100818568	probable protein phosphatase 2C 8
gma-u.5	100813248	probable protein phosphatase 2C 8
gma-u.5	100807302	protein phosphatase 2C 37
sly-u.5	PP2C-2	protein phosphatase 2C AHG3 homolog
sly-u.5	101244003	probable protein phosphatase 2C 24
sly-u.5	101248778	protein phosphatase 2C 37
osa-u.5	PP2C68	probable protein phosphatase 2C 68
osa-u.5	4324182	probable protein phosphatase 2C 8
osa-u.5	4339671	protein phosphatase 2C 51-like
zma-u.5	100279578	uncharacterized LOC100279578
zma-u.5	100282657	uncharacterized LOC100282657
zma-u.5	100285223	protein phosphatase 2C ABI1
bra-r.6	103868043	probable protein phosphatase 2C 24
bra-r.6	103845976	protein phosphatase 2C 37
bra-r.6	103845336	probable protein phosphatase 2C 78
vvi-u.5	100267287	protein phosphatase 2C 51
vvi-u.5	100255251	probable protein phosphatase 2C 24
ppo-u.5	7467562	protein phosphatase 2C 37
ppo-u.5	7481518	probable protein phosphatase 2C 24
mtr-u.5	11435594	protein phosphatase 2C 37
mtr-u.5	11436220	probable protein phosphatase 2C 8
mtr-u.5	25489354	probable protein phosphatase 2C 24
tae-r.2	123070252	probable protein phosphatase 2C 8
tae-r.2	123078700	probable protein phosphatase 2C 8
tae-r.2	123071396	probable protein phosphatase 2C 9
hvu-r.1	123449042	probable protein phosphatase 2C 30
hvu-r.1	123444909	probable protein phosphatase 2C 9
hvu-r.1	123444003	probable protein phosphatase 2C 8
ghi-r.1	107906580	probable protein phosphatase 2C 24
ghi-r.1	107929509	probable protein phosphatase 2C 8
ghi-r.1	107930197	protein phosphatase 2C 51
bna-r.1	125591349	protein phosphatase 2C 3-like
bna-r.1	111215747	protein phosphatase 2C 37
sbi-r.1	8084948	probable protein phosphatase 2C 30
sbi-r.1	8054565	probable protein phosphatase 2C 68
sbi-r.1	8058897	probable protein phosphatase 2C 9
sot-r.1	102596252	protein phosphatase 2C 37-like
sot-r.1	102582408	probable protein phosphatase 2C 51
cit-r.1	102611031	probable protein phosphatase 2C 24
cit-r.1	102621444	protein phosphatase 2C 51-like
cit-r.1	102629888	protein phosphatase 2C 37
bdi-r.1	100823313	probable protein phosphatase 2C 68
bdi-r.1	100834162	probable protein phosphatase 2C 30
nta-r.1	107770314	protein phosphatase 2C 51

Top 50 coexpressed genes to CHLRE_03g211073v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_03g211073v5 (cre-r.1 coexpression data)

CoexMap"5724961"

[Cytoscape]

Annotation

functional annotation

KEGG

cre04016 [list] [network] MAPK signaling pathway - plant (29 genes)

cre04075 [list] [network] Plant hormone signal transduction (39 genes)

GO BP

GO:0006470 [list] [network] protein dephosphorylation

(54 genes)

IEA

GO CC

GO:0005829 [list] [network] cytosol	(481 genes)	IEA
GO:0005634 [list] [network] nucleus	(1576 genes)	IEA

GO MF

GO:0004722 [list] [network] protein serine/threonine phosphatase activity	(38 genes)	IEA
GO:0043169 [list] [network] cation binding	(727 genes)	IEA

Protein

XP_042926706.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 3, mito 2, cysk_nucl 2, nucl_plas 2

(predict for XP_042926706.1)

Subcellular
localization
TargetP

other 5, chlo 3

(predict for XP_042926706.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_03g211073v5	ath-u.5 for HAI3	ath-u.5 for PP2CA	ath-u.5 for HAI1	gma-u.5 for 100818568	gma-u.5 for 100813248	gma-u.5 for 100807302	sly-u.5 for PP2C-2	sly-u.5 for 101244003	sly-u.5 for 101248778	osa-u.5 for PP2C68	osa-u.5 for 4324182	osa-u.5 for 4339671	zma-u.5 for 100279578	zma-u.5 for 100282657	zma-u.5 for 100285223	bra-r.6 for 103868043	bra-r.6 for 103845976	bra-r.6 for 103845336	vvi-u.5 for 100267287	vvi-u.5 for 100255251	ppo-u.5 for 7467562	ppo-u.5 for 7481518	mtr-u.5 for 11435594	mtr-u.5 for 11436220	mtr-u.5 for 25489354	tae-r.2 for 123070252	tae-r.2 for 123078700	tae-r.2 for 123071396	hvu-r.1 for 123449042	hvu-r.1 for 123444909	hvu-r.1 for 123444003	ghi-r.1 for 107906580	ghi-r.1 for 107929509	ghi-r.1 for 107930197	bna-r.1 for 125591349	bna-r.1 for 111215747	sbi-r.1 for 8084948	sbi-r.1 for 8054565	sbi-r.1 for 8058897	sot-r.1 for 102596252	sot-r.1 for 102582408	cit-r.1 for 102611031	cit-r.1 for 102621444	cit-r.1 for 102629888	bdi-r.1 for 100823313	bdi-r.1 for 100834162	nta-r.1 for 107770314

Ortholog

Ortholog ID: 501

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

CHLRE_03g211073v5

HAI3

PP2CA

HAI2

Function^*

uncharacterized protein

highly ABA-induced PP2C protein 3

protein phosphatase 2CA

highly ABA-induced PP2C protein 2

probable protein phosphatase 2C 51

protein phosphatase 2C 37

protein phosphatase 2C 51-like

probable protein phosphatase 2C 49

probable protein phosphatase 2C 30

probable protein phosphatase 2C 9

uncharacterized LOC100279578

uncharacterized LOC100282657

uncharacterized LOC103636504

protein phosphatase 2C 37

protein phosphatase 2C 3

protein phosphatase 2C 51

probable protein phosphatase 2C 24

protein phosphatase 2C 37

protein phosphatase 2C 51

protein phosphatase 2C 37

probable protein phosphatase 2C 8

protein phosphatase 2C 51

probable protein phosphatase 2C 8

probable protein phosphatase 2C 68

probable protein phosphatase 2C 8

protein phosphatase 2C 51-like

probable protein phosphatase 2C 68

probable protein phosphatase 2C 24

protein phosphatase 2C 51

probable protein phosphatase 2C 24

protein phosphatase 2C 3-like

protein phosphatase 2C 37

probable protein phosphatase 2C 78

probable protein phosphatase 2C 68

probable protein phosphatase 2C 9

uncharacterized LOC110432288

probable protein phosphatase 2C 51

probable protein phosphatase 2C 24

protein phosphatase 2C 51-like

protein phosphatase 2C 37

probable protein phosphatase 2C 68

probable protein phosphatase 2C 8

protein phosphatase 2C 37-like

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	3
ath04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	8
ath04016	MAPK signaling pathway - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	6
ath04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	3
gma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	4
gma04075	Plant hormone signal transduction	4
gma00500	Starch and sucrose metabolism	2
gma02010	ABC transporters	2
gma04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	5
gma04075	Plant hormone signal transduction	5
gma00500	Starch and sucrose metabolism	2
gma02010	ABC transporters	2
gma04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	6
sly04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	3
sly04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	8
osa04016	MAPK signaling pathway - plant	6
osa00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	8
osa04016	MAPK signaling pathway - plant	6
osa00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	7
osa04016	MAPK signaling pathway - plant	6
osa00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	11
zma04016	MAPK signaling pathway - plant	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	8
zma04016	MAPK signaling pathway - plant	7
zma00906	Carotenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	9
zma04075	Plant hormone signal transduction	9
zma00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	5
bra04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	4
bra04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	4
vvi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	4
vvi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	7
ppo04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	8
ppo04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	4
ppo04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	6
mtr04016	MAPK signaling pathway - plant	5
mtr00562	Inositol phosphate metabolism	2
mtr04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	3
mtr04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	12
tae04075	Plant hormone signal transduction	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	9
tae04075	Plant hormone signal transduction	9
tae00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	12
tae04075	Plant hormone signal transduction	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04016	MAPK signaling pathway - plant	2
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	5
hvu00310	Lysine degradation	3
hvu04016	MAPK signaling pathway - plant	3
hvu00010	Glycolysis / Gluconeogenesis	2
hvu00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	4
ghi04075	Plant hormone signal transduction	4
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	3
ghi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	6
bna04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	4
bna04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	6
bna04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	5
sbi04075	Plant hormone signal transduction	5
sbi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	8
sbi04016	MAPK signaling pathway - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	4
sbi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	6
sot04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	7
sot04016	MAPK signaling pathway - plant	6
sot00564	Glycerophospholipid metabolism	2
sot00565	Ether lipid metabolism	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	5
cit04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	4
cit04075	Plant hormone signal transduction	4
cit00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	7
cit04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	6
bdi04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	5
bdi04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	8
nta04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	8
nta04016	MAPK signaling pathway - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	8
nta04075	Plant hormone signal transduction	8

Expression

Expression pattern

Entrez Gene ID^*

5724961

817487

820314

837255

100807235

100796161

100781388

101248778

101249794

9270549

4332374

4327465

100279578

100282657

103636504

103845976

103843946

103843457

100267287

100255251

7467562

7458124

7489826

11435594

11436220

25482353

123078700

123103505

123111722

123444003

123420258

123395405

107906580

107937605

121215534

125591349

106452531

106433287

8054565

8058897

110432288

102582408

102601835

102611031

102621444

102629888

100823313

100838998

107779894

107803211

107760683

The preparation time of this page was 0.3 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	3	3	3	3	3	3	2	2	3	3	3	3	2	3	2	3	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_03g211073v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_03g211073v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**