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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-r.7   100776823   probable starch synthase 4, chloroplastic/amyloplastic 
 gma-u.5   100776823   probable starch synthase 4, chloroplastic/amyloplastic 
 gma-m.5   100776823   probable starch synthase 4, chloroplastic/amyloplastic 
 mtr-u.5   11434412   probable starch synthase 4, chloroplastic/amyloplastic 
 mtr-u.5   11443055   uncharacterized LOC11443055 
 ppo-u.5   7465541   probable starch synthase 4, chloroplastic/amyloplastic 
 ath-u.5   AT5G65685   UDP-Glycosyltransferase superfamily protein 
 bra-r.6   103874008   probable starch synthase 4, chloroplastic/amyloplastic 
 vvi-u.5   100233139   probable starch synthase 4, chloroplastic/amyloplastic 
 ghi-r.1   107935278   probable starch synthase 4, chloroplastic/amyloplastic 
 ghi-r.1   107950505   probable starch synthase 4, chloroplastic/amyloplastic 
 bna-r.1   106348101   probable starch synthase 4, chloroplastic/amyloplastic 
 bna-r.1   106348187   probable starch synthase 4, chloroplastic/amyloplastic 
 cit-r.1   102630794   probable starch synthase 4, chloroplastic/amyloplastic 
 sly-u.5   101249596   probable starch synthase 4, chloroplastic/amyloplastic 
 sot-r.1   102577506   starch synthase V precursor 
 nta-r.1   107801864   putative starch synthase 4, chloroplastic/amyloplastic 
 nta-r.1   107829978   putative starch synthase 4, chloroplastic/amyloplastic 
 osa-u.5   4331077   probable starch synthase 4, chloroplastic/amyloplastic 
 zma-u.5   100170250   starch synthase V 
 zma-u.5   103628906   uncharacterized LOC103628906 
 sbi-r.1   8056415   probable starch synthase 4, chloroplastic/amyloplastic 

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Top 50 coexpressed genes to 100776823 (gma-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100776823 (gma-r.7 coexpression data)

CoexMap"100776823"


gmaLOC100776823 | Entrez gene ID : 100776823      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma sbi hvu tae cre bdi
Paralog 3 2 1 1 1 1 2 2 1 1 1 2 1 2 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00500 [list] [network] Starch and sucrose metabolism (292 genes)
GO BP
GO CC
GO MF
Protein XP_003517680.2 [sequence] [blastp]
XP_006572982.1 [sequence] [blastp]
XP_014623053.1 [sequence] [blastp]
XP_014623075.1 [sequence] [blastp]
XP_025981860.1 [sequence] [blastp]
XP_025981879.1 [sequence] [blastp]
XP_040860635.1 [sequence] [blastp]
XP_040874475.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 3,  chlo_mito 3  (predict for XP_003517680.2)
chlo 6,  cyto 3,  chlo_mito 3  (predict for XP_006572982.1)
chlo 5,  cyto 4,  nucl 1  (predict for XP_014623053.1)
chlo 4,  plas 2,  nucl 1,  E.R._plas 1,  mito_plas 1  (predict for XP_014623075.1)
chlo 6,  chlo_mito 4,  nucl 1,  mito 1  (predict for XP_025981860.1)
chlo 6,  chlo_mito 4,  nucl 2,  cyto_mito 1  (predict for XP_025981879.1)
chlo 6,  chlo_mito 4,  nucl 1,  cyto_mito 1  (predict for XP_040860635.1)
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_040874475.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_003517680.2)
chlo 6  (predict for XP_006572982.1)
other 5  (predict for XP_014623053.1)
chlo 6  (predict for XP_014623075.1)
chlo 6  (predict for XP_025981860.1)
chlo 6  (predict for XP_025981879.1)
chlo 6  (predict for XP_040860635.1)
other 9  (predict for XP_040874475.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-r.7
for
100776823
gma-u.5
for
100776823
gma-m.5
for
100776823
mtr-u.5
for
11434412
mtr-u.5
for
11443055
ppo-u.5
for
7465541
ath-u.5
for
AT5G65685
bra-r.6
for
103874008
vvi-u.5
for
100233139
ghi-r.1
for
107935278
ghi-r.1
for
107950505
bna-r.1
for
106348101
bna-r.1
for
106348187
cit-r.1
for
102630794
sly-u.5
for
101249596
sot-r.1
for
102577506
nta-r.1
for
107801864
nta-r.1
for
107829978
osa-u.5
for
4331077
zma-u.5
for
100170250
zma-u.5
for
103628906
sbi-r.1
for
8056415


Ortholog ID: 12020
Species gma mtr mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma zma sbi
Symbol LOC100776823 LOC11434412 LOC11443055 LOC7465541 AT5G65685 LOC103874008 LOC100233139 LOC107935278 LOC107950505 LOC106348101 LOC106348187 LOC102630794 LOC101249596 LOC102577506 LOC107801864 LOC107829978 LOC4331077 LOC100170250 LOC103628906 LOC8056415
Function* probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic uncharacterized LOC11443055 probable starch synthase 4, chloroplastic/amyloplastic UDP-Glycosyltransferase superfamily protein probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic starch synthase V precursor putative starch synthase 4, chloroplastic/amyloplastic putative starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic starch synthase V uncharacterized LOC103628906 probable starch synthase 4, chloroplastic/amyloplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 6
mtr00520 Amino sugar and nucleotide sugar metabolism 3
mtr01250 Biosynthesis of nucleotide sugars 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
bra00340 Histidine metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 13
sot00520 Amino sugar and nucleotide sugar metabolism 5
sot01250 Biosynthesis of nucleotide sugars 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00500 Starch and sucrose metabolism 2
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00500 Starch and sucrose metabolism 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100776823 11434412 11443055 7465541 836698 103874008 100233139 107935278 107950505 106348101 106348187 102630794 101249596 102577506 107801864 107829978 4331077 100170250 103628906 8056415
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