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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107829978   putative starch synthase 4, chloroplastic/amyloplastic 
 sly-u.5   101249596   probable starch synthase 4, chloroplastic/amyloplastic 
 ath-u.5   AT5G65685   UDP-Glycosyltransferase superfamily protein 
 gma-u.5   100776823   probable starch synthase 4, chloroplastic/amyloplastic 
 vvi-u.5   100233139   probable starch synthase 4, chloroplastic/amyloplastic 
 ppo-u.5   7465541   probable starch synthase 4, chloroplastic/amyloplastic 
 mtr-u.5   11443055   uncharacterized LOC11443055 
 mtr-u.5   11434412   probable starch synthase 4, chloroplastic/amyloplastic 
 osa-u.5   4331077   probable starch synthase 4, chloroplastic/amyloplastic 
 zma-u.5   100170250   starch synthase V 
 zma-u.5   103628906   uncharacterized LOC103628906 

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Top 50 coexpressed genes to 107829978 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107829978 (nta-r.1 coexpression data)

CoexMap"107829978"


ntaLOC107829978 | Entrez gene ID : 107829978      
Species nta sly ath gma vvi ppo mtr osa zma sot hvu tae cit sbi ghi cre bna bdi bra
Paralog 1 1 1 1 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00500 [list] [network] Starch and sucrose metabolism (286 genes)
GO BP
GO CC
GO MF
Protein XP_016512931.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  cyto 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_016512931.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016512931.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107829978

.
sly-u.5
for
101249596

.
ath-u.5
for
AT5G65685

.
gma-u.5
for
100776823

.
vvi-u.5
for
100233139

.
ppo-u.5
for
7465541

.
mtr-u.5
for
11443055

.
mtr-u.5
for
11434412

.
osa-u.5
for
4331077

.
zma-u.5
for
100170250

.
zma-u.5
for
103628906

.


Ortholog ID: 12020
Species ath gma sly osa zma zma bra vvi ppo mtr mtr ghi ghi bna sbi sot cit nta nta
Symbol AT5G65685 LOC100776823 LOC101249596 LOC4331077 LOC100170250 LOC103628906 LOC103874008 LOC100233139 LOC7465541 LOC11443055 LOC11434412 LOC107935278 LOC107950505 LOC106348101 LOC8056415 LOC102577506 LOC102630794 LOC107801864 LOC107829978
Function* UDP-Glycosyltransferase superfamily protein probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic starch synthase V uncharacterized LOC103628906 probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic uncharacterized LOC11443055 probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic starch synthase V precursor probable starch synthase 4, chloroplastic/amyloplastic putative starch synthase 4, chloroplastic/amyloplastic putative starch synthase 4, chloroplastic/amyloplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
bra00340 Histidine metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 6
mtr00520 Amino sugar and nucleotide sugar metabolism 3
mtr01250 Biosynthesis of nucleotide sugars 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 13
sot00520 Amino sugar and nucleotide sugar metabolism 5
sot01250 Biosynthesis of nucleotide sugars 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00500 Starch and sucrose metabolism 2
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00500 Starch and sucrose metabolism 2
nta03450 Non-homologous end-joining 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836698 100776823 101249596 4331077 100170250 103628906 103874008 100233139 7465541 11443055 11434412 107935278 107950505 106348101 8056415 102577506 102630794 107801864 107829978
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