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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-r.7   100810567   cellulose synthase A catalytic subunit 1 [UDP-forming] 
 gma-u.5   100810567   cellulose synthase A catalytic subunit 1 [UDP-forming] 
 gma-u.5   100794515   cellulose synthase A catalytic subunit 2 [UDP-forming] 
 gma-u.5   100806522   cellulose synthase A catalytic subunit 8 [UDP-forming] 
 gma-u.5   100819146   cellulose synthase A catalytic subunit 6 [UDP-forming] 
 mtr-u.5   25501056   cellulose synthase A catalytic subunit 3 [UDP-forming] 
 mtr-u.5   25499513   cellulose synthase A catalytic subunit 3 [UDP-forming] 
 mtr-u.5   25485999   cellulose synthase A catalytic subunit 8 [UDP-forming] 
 ppo-u.5   18098691   probable cellulose synthase A catalytic subunit 3 [UDP-forming] 
 ppo-u.5   7459022   cellulose synthase A catalytic subunit 1 [UDP-forming] 
 ppo-u.5   7459550   cellulose synthase A catalytic subunit 4 [UDP-forming] 
 ath-u.5   CESA6   cellulose synthase 6 
 ath-u.5   CESA10   cellulose synthase A catalytic subunit 3 UDP-forming-like protein 
 ath-u.5   IRX1   cellulose synthase family protein 
 bra-r.6   103861013   cellulose synthase A catalytic subunit 8 [UDP-forming] 
 bra-r.6   103873901   cellulose synthase A catalytic subunit 6 [UDP-forming] 
 vvi-u.5   100254408   cellulose synthase A catalytic subunit 1 [UDP-forming] 
 vvi-u.5   100241197   cellulose synthase A catalytic subunit 4 [UDP-forming] 
 vvi-u.5   100242715   probable cellulose synthase A catalytic subunit 5 [UDP-forming] 
 ghi-r.1   107911480   cellulose synthase A catalytic subunit 2 [UDP-forming] 
 ghi-r.1   107914099   cellulose synthase A catalytic subunit 5 [UDP-forming] 
 ghi-r.1   107915763   cellulose synthase A catalytic subunit 3 [UDP-forming] 
 bna-r.1   106423367   cellulose synthase A catalytic subunit 1 [UDP-forming]-like 
 bna-r.1   106422729   cellulose synthase A catalytic subunit 3 [UDP-forming] 
 bna-r.1   106415724   cellulose synthase A catalytic subunit 8 [UDP-forming] 
 cit-r.1   102611367   probable cellulose synthase A catalytic subunit 3 [UDP-forming] 
 cit-r.1   102629226   cellulose synthase A catalytic subunit 8 [UDP-forming] 
 cit-r.1   102619893   cellulose synthase A catalytic subunit 4 [UDP-forming] 
 sly-u.5   101246863   cellulose synthase A catalytic subunit 3 [UDP-forming] 
 sly-u.5   101248888   cellulose synthase A catalytic subunit 7 [UDP-forming] 
 sly-u.5   101263703   probable cellulose synthase A catalytic subunit 3 [UDP-forming] 
 sot-r.1   102577573   cellulose synthase A catalytic subunit 1 [UDP-forming] 
 sot-r.1   102597254   cellulose synthase A catalytic subunit 4 [UDP-forming] 
 sot-r.1   102591463   cellulose synthase A catalytic subunit 5 [UDP-forming] 
 nta-r.1   107795298   cellulose synthase A catalytic subunit 1 [UDP-forming] 
 nta-r.1   107790031   cellulose synthase A catalytic subunit 1 [UDP-forming] 
 osa-u.5   4324625   cellulose synthase A catalytic subunit 4 [UDP-forming]-like 
 osa-u.5   4334515   probable cellulose synthase A catalytic subunit 2 [UDP-forming] 
 osa-u.5   4337958   probable cellulose synthase A catalytic subunit 1 [UDP-forming] 
 zma-u.5   542685   cellulose synthase10 
 zma-u.5   100280232   Cellulose synthase A catalytic subunit 5 [UDP-forming] 
 zma-u.5   542564   cellulose synthase 2 
 tae-r.2   123070786   cellulose synthase A catalytic subunit 4 [UDP-forming] 
 tae-r.2   123062060   cellulose synthase A catalytic subunit 4 [UDP-forming] 
 tae-r.2   123045072   cellulose synthase A catalytic subunit 7 [UDP-forming] 
 hvu-r.1   123398002   cellulose synthase A catalytic subunit 9 [UDP-forming] 
 hvu-r.1   123394950   probable cellulose synthase A catalytic subunit 3 [UDP-forming] 
 hvu-r.1   123401282   probable cellulose synthase A catalytic subunit 1 [UDP-forming] 
 sbi-r.1   8083471   cellulose synthase A catalytic subunit 5 [UDP-forming] 
 sbi-r.1   110432834   probable cellulose synthase A catalytic subunit 3 [UDP-forming] 
 sbi-r.1   8080953   probable cellulose synthase A catalytic subunit 1 [UDP-forming] 
 bdi-r.1   100832508   probable cellulose synthase A catalytic subunit 3 [UDP-forming] 
 bdi-r.1   100821105   probable cellulose synthase A catalytic subunit 1 [UDP-forming] 
 bdi-r.1   100822586   probable cellulose synthase A catalytic subunit 2 [UDP-forming] 

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Top 50 coexpressed genes to 100810567 (gma-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100810567 (gma-r.7 coexpression data)

CoexMap"100810567"


gmaLOC100810567 | Entrez gene ID : 100810567    
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 3 3 2 3 3 3 3 3 3 2 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009833 [list] [network] plant-type primary cell wall biogenesis  (58 genes)  IEA  
GO:0030244 [list] [network] cellulose biosynthetic process  (78 genes)  IEA  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (213 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (1870 genes)  IEA  
GO MF
GO:0016760 [list] [network] cellulose synthase (UDP-forming) activity  (59 genes)  IEA  
Protein XP_003522623.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for XP_003522623.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003522623.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-r.7
for
100810567
gma-u.5
for
100810567
gma-u.5
for
100794515
gma-u.5
for
100806522
gma-u.5
for
100819146
mtr-u.5
for
25501056
mtr-u.5
for
25499513
mtr-u.5
for
25485999
ppo-u.5
for
18098691
ppo-u.5
for
7459022
ppo-u.5
for
7459550
ath-u.5
for
CESA6
ath-u.5
for
CESA10
ath-u.5
for
IRX1
bra-r.6
for
103861013
bra-r.6
for
103873901
vvi-u.5
for
100254408
vvi-u.5
for
100241197
vvi-u.5
for
100242715
ghi-r.1
for
107911480
ghi-r.1
for
107914099
ghi-r.1
for
107915763
bna-r.1
for
106423367
bna-r.1
for
106422729
bna-r.1
for
106415724
cit-r.1
for
102611367
cit-r.1
for
102629226
cit-r.1
for
102619893
sly-u.5
for
101246863
sly-u.5
for
101248888
sly-u.5
for
101263703
sot-r.1
for
102577573
sot-r.1
for
102597254
sot-r.1
for
102591463
nta-r.1
for
107795298
nta-r.1
for
107790031
osa-u.5
for
4324625
osa-u.5
for
4334515
osa-u.5
for
4337958
zma-u.5
for
542685
zma-u.5
for
100280232
zma-u.5
for
542564
tae-r.2
for
123070786
tae-r.2
for
123062060
tae-r.2
for
123045072
hvu-r.1
for
123398002
hvu-r.1
for
123394950
hvu-r.1
for
123401282
sbi-r.1
for
8083471
sbi-r.1
for
110432834
sbi-r.1
for
8080953
bdi-r.1
for
100832508
bdi-r.1
for
100821105
bdi-r.1
for
100822586


Ortholog ID: 120
Species gma gma gma mtr mtr mtr ppo ppo ppo ath ath ath bra bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC100798759 LOC100790276 LOC100793104 LOC25499513 LOC11443809 LOC11440412 LOC18098691 LOC7470198 LOC7492474 IRX3 CESA4 CESA9 LOC103861013 LOC103840033 LOC103855617 LOC100242715 LOC100252166 LOC100256811 LOC107909647 LOC107953681 LOC107950592 LOC106411008 LOC106384921 LOC111203360 LOC102629226 LOC102617105 LOC101263703 LOC101265982 LOC101246281 LOC102597254 LOC102578178 LOC102577470 LOC107771167 LOC107828491 LOC107817758 LOC4324625 LOC4337958 LOC4343049 LOC542514 LOC542489 LOC103647318 LOC123051534 LOC123079172 LOC123105553 LOC123398002 LOC123401282 LOC123426920 LOC8083471 LOC8080185 LOC8057104 LOC100822586 LOC100833611 LOC100843814
Function* cellulose synthase A catalytic subunit 2 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 7 [UDP-forming] probable cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 8 [UDP-forming] cellulose synthase A catalytic subunit 2 [UDP-forming] Cellulose synthase family protein cellulose synthase A4 cellulose synthase A9 cellulose synthase A catalytic subunit 8 [UDP-forming] cellulose synthase A catalytic subunit 2 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] probable cellulose synthase A catalytic subunit 5 [UDP-forming] probable cellulose synthase A catalytic subunit 8 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 8 [UDP-forming]-like cellulose synthase A catalytic subunit 7 [UDP-forming]-like cellulose synthase A catalytic subunit 2 [UDP-forming] cellulose synthase A catalytic subunit 4 [UDP-forming] cellulose synthase A catalytic subunit 5 [UDP-forming] cellulose synthase A catalytic subunit 1 [UDP-forming]-like cellulose synthase A catalytic subunit 8 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] probable cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 5 [UDP-forming] cellulose synthase A catalytic subunit 4 [UDP-forming] cellulose synthase A catalytic subunit 4 [UDP-forming] cellulose synthase A catalytic subunit 7 [UDP-forming] cellulose synthase A catalytic subunit 2 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 8 [UDP-forming] cellulose synthase A catalytic subunit 4 [UDP-forming]-like cellulose synthase A catalytic subunit 4 [UDP-forming]-like probable cellulose synthase A catalytic subunit 1 [UDP-forming] probable cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase catalytic subunit 12 cellulose synthase 3 probable cellulose synthase A catalytic subunit 6 [UDP-forming] probable cellulose synthase A catalytic subunit 8 [UDP-forming] cellulose synthase A catalytic subunit 4 [UDP-forming] probable cellulose synthase A catalytic subunit 2 [UDP-forming] cellulose synthase A catalytic subunit 9 [UDP-forming] probable cellulose synthase A catalytic subunit 1 [UDP-forming] probable cellulose synthase A catalytic subunit 1 [UDP-forming] cellulose synthase A catalytic subunit 5 [UDP-forming] probable cellulose synthase A catalytic subunit 5 [UDP-forming] probable cellulose synthase A catalytic subunit 2 [UDP-forming] probable cellulose synthase A catalytic subunit 2 [UDP-forming] probable cellulose synthase A catalytic subunit 8 [UDP-forming] cellulose synthase A catalytic subunit 9 [UDP-forming]
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 4
sly00510 N-Glycan biosynthesis 3
sly00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00941 Flavonoid biosynthesis 2
zma00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04517 IgSF CAM signaling 3
tae05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 2
hvu04517 IgSF CAM signaling 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 4
bdi00460 Cyanoamino acid metabolism 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100798759 100790276 100793104 25499513 11443809 11440412 18098691 7470198 7492474 831608 834426 816713 103861013 103840033 103855617 100242715 100252166 100256811 107909647 107953681 107950592 106411008 106384921 111203360 102629226 102617105 101263703 101265982 101246281 102597254 102578178 102577470 107771167 107828491 107817758 4324625 4337958 4343049 542514 542489 103647318 123051534 123079172 123105553 123398002 123401282 123426920 8083471 8080185 8057104 100822586 100833611 100843814
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