Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100775939   pentatricopeptide repeat-containing protein At5g39350 
 gma-r.7   100775939   pentatricopeptide repeat-containing protein At5g39350 
 vvi-u.5   100267994   pentatricopeptide repeat-containing protein At5g39350 
 sly-u.5   101265993   pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 sot-r.1   102591398   pentatricopeptide repeat-containing protein DOT4, chloroplastic-like 
 nta-r.1   107770657   pentatricopeptide repeat-containing protein At4g13650-like 
 nta-r.1   107828751   pentatricopeptide repeat-containing protein DOT4, chloroplastic-like 
 osa-u.5   4331862   pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 zma-u.5   103639494   pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 bdi-r.1   106865388   pentatricopeptide repeat-containing protein At4g33990 

close


Top 50 coexpressed genes to 100775939 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100775939 (gma-u.5 coexpression data)

CoexMap"100775939"


gmaLOC100775939 | Entrez gene ID : 100775939    
Species gma vvi sly sot nta osa zma bdi sbi cit mtr bra tae ath bna hvu ppo ghi cre
Paralog 2 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003551036.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  E.R. 1,  cyto 1,  mito 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_003551036.1)
Subcellular
localization
TargetP
other 1  (predict for XP_003551036.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100775939
gma-r.7
for
100775939
vvi-u.5
for
100267994
sly-u.5
for
101265993
sot-r.1
for
102591398
nta-r.1
for
107770657
nta-r.1
for
107828751
osa-u.5
for
4331862
zma-u.5
for
103639494
bdi-r.1
for
106865388


Ortholog ID: 14928
Species gma vvi sly sot nta nta osa zma bdi
Symbol LOC100775939 LOC100267994 LOC101265993 LOC102591398 LOC107770657 LOC107828751 LOC4331862 LOC103639494 LOC106865388
Function* pentatricopeptide repeat-containing protein At5g39350 pentatricopeptide repeat-containing protein At5g39350 pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic-like pentatricopeptide repeat-containing protein At4g13650-like pentatricopeptide repeat-containing protein DOT4, chloroplastic-like pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein At4g33990
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100775939 100267994 101265993 102591398 107770657 107828751 4331862 103639494 106865388
The preparation time of this page was 0.2 [sec].