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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103639494   pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 zma-r.6   103639494   pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 osa-u.5   4331862   pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 bdi-r.1   106865388   pentatricopeptide repeat-containing protein At4g33990 
 gma-u.5   100775939   pentatricopeptide repeat-containing protein At5g39350 
 sly-u.5   101265993   pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 vvi-u.5   100267994   pentatricopeptide repeat-containing protein At5g39350 
 sot-r.1   102591398   pentatricopeptide repeat-containing protein DOT4, chloroplastic-like 
 nta-r.1   107770657   pentatricopeptide repeat-containing protein At4g13650-like 
 nta-r.1   107828751   pentatricopeptide repeat-containing protein DOT4, chloroplastic-like 

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Top 50 coexpressed genes to 103639494 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103639494 (zma-u.5 coexpression data)

CoexMap"103639494"


zmaLOC103639494 | Entrez gene ID : 103639494      
Species zma osa bdi gma sly vvi sot nta hvu tae bna ppo cre mtr sbi ath bra ghi cit
Paralog 2 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (350 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein XP_008660468.1 [sequence] [blastp]
XP_008660469.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 1,  plas 1,  vacu 1,  E.R. 1,  nucl_plas 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_008660468.1)
chlo 3,  nucl 1,  plas 1,  vacu 1,  E.R. 1,  nucl_plas 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_008660469.1)
Subcellular
localization
TargetP
other 7  (predict for XP_008660468.1)
other 7  (predict for XP_008660469.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103639494
zma-r.6
for
103639494
osa-u.5
for
4331862
bdi-r.1
for
106865388
gma-u.5
for
100775939
sly-u.5
for
101265993
vvi-u.5
for
100267994
sot-r.1
for
102591398
nta-r.1
for
107770657
nta-r.1
for
107828751


Ortholog ID: 14928
Species zma osa bdi gma sly vvi sot nta nta
Symbol LOC103639494 LOC4331862 LOC106865388 LOC100775939 LOC101265993 LOC100267994 LOC102591398 LOC107770657 LOC107828751
Function* pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At5g39350 pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein At5g39350 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like pentatricopeptide repeat-containing protein At4g13650-like pentatricopeptide repeat-containing protein DOT4, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103639494 4331862 106865388 100775939 101265993 100267994 102591398 107770657 107828751
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