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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100780991   E3 ubiquitin-protein ligase CIP8 
 gma-r.7   100780991   E3 ubiquitin-protein ligase CIP8 
 gma-m.5   100780991   E3 ubiquitin-protein ligase CIP8 
 gma-u.5   100802200   E3 ubiquitin-protein ligase CIP8 
 mtr-u.5   25485660   E3 ubiquitin-protein ligase CIP8 
 ath-u.5   CIP8   COP1-interacting protein 8 
 bra-r.6   103837560   E3 ubiquitin-protein ligase CIP8 
 vvi-u.5   100250690   E3 ubiquitin-protein ligase CIP8-like 
 bna-r.1   106414554   E3 ubiquitin-protein ligase CIP8 
 bna-r.1   125593352   E3 ubiquitin-protein ligase CIP8-like 
 cit-r.1   102608994   E3 ubiquitin-protein ligase CIP8 
 sly-u.5   101260762   E3 ubiquitin-protein ligase CIP8 
 sot-r.1   102583669   E3 ubiquitin-protein ligase CIP8 
 nta-r.1   107832293   E3 ubiquitin-protein ligase CIP8-like 
 nta-r.1   142167866   E3 ubiquitin-protein ligase CIP8-like 

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Top 50 coexpressed genes to 100780991 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100780991 (gma-u.5 coexpression data)

CoexMap"100780991"


gmaLOC100780991 | Entrez gene ID : 100780991      
Species gma mtr ath bra vvi bna cit sly sot nta sbi osa tae hvu ppo ghi zma cre bdi
Paralog 4 1 1 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (610 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (292 genes)  IEA  
Protein XP_003555834.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_003555834.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_003555834.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100780991
gma-r.7
for
100780991
gma-m.5
for
100780991
gma-u.5
for
100802200
mtr-u.5
for
25485660
ath-u.5
for
CIP8
bra-r.6
for
103837560
vvi-u.5
for
100250690
bna-r.1
for
106414554
bna-r.1
for
125593352
cit-r.1
for
102608994
sly-u.5
for
101260762
sot-r.1
for
102583669
nta-r.1
for
107832293
nta-r.1
for
142167866


Ortholog ID: 13469
Species gma gma mtr ath bra vvi bna bna cit sly sot nta nta
Symbol LOC100780991 LOC100802200 LOC25485660 CIP8 LOC103837560 LOC100250690 LOC125593352 LOC125577761 LOC102608994 LOC101260762 LOC102583669 LOC107832293 LOC142167866
Function* E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 COP1-interacting protein 8 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8-like E3 ubiquitin-protein ligase CIP8-like E3 ubiquitin-protein ligase CIP8-like E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8-like E3 ubiquitin-protein ligase CIP8-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
vvi03250 Viral life cycle - HIV-1 2
vvi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04120 Ubiquitin mediated proteolysis 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00260 Glycine, serine and threonine metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta01200 Carbon metabolism 4
nta04075 Plant hormone signal transduction 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100780991 100802200 25485660 836616 103837560 100250690 125593352 125577761 102608994 101260762 102583669 107832293 142167866
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