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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   CIP8   COP1-interacting protein 8 
 ath-r.7   CIP8   COP1-interacting protein 8 
 ath-m.9   CIP8   COP1-interacting protein 8 
 ath-e.2   CIP8   COP1-interacting protein 8 
 ath-m.4.bio   CIP8   COP1-interacting protein 8 
 ath-m.4.hor   CIP8   COP1-interacting protein 8 
 ath-m.4.lig   CIP8   COP1-interacting protein 8 
 ath-m.4.str   CIP8   COP1-interacting protein 8 
 ath-m.4.tis   CIP8   COP1-interacting protein 8 
 gma-u.5   100780991   E3 ubiquitin-protein ligase CIP8 
 gma-u.5   100802200   E3 ubiquitin-protein ligase CIP8 
 vvi-u.5   100250690   E3 ubiquitin-protein ligase CIP8-like 
 mtr-u.5   25485660   E3 ubiquitin-protein ligase CIP8 
 sly-u.5   101260762   E3 ubiquitin-protein ligase CIP8 

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Top 50 coexpressed genes to CIP8 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CIP8 (ath-u.5 coexpression data)

CoexMap"836616"


athCIP8 | Entrez gene ID : 836616      
Species ath gma vvi mtr sly bdi hvu bra cit bna ppo sbi ghi osa sot nta cre tae zma
Paralog 9 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (170 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_201297.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_201297.1)
Subcellular
localization
TargetP
other 8  (predict for NP_201297.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
CIP8
ath-r.7
for
CIP8
ath-m.9
for
CIP8
ath-e.2
for
CIP8
ath-m.4.bio
for
CIP8
ath-m.4.hor
for
CIP8
ath-m.4.lig
for
CIP8
ath-m.4.str
for
CIP8
ath-m.4.tis
for
CIP8
gma-u.5
for
100780991
gma-u.5
for
100802200
vvi-u.5
for
100250690
mtr-u.5
for
25485660
sly-u.5
for
101260762


Ortholog ID: 13469
Species ath bra bna cit gma gma vvi mtr sly sot nta nta
Symbol CIP8 LOC103837560 LOC125593352 LOC102608994 LOC100802200 LOC100780991 LOC100250690 LOC25485660 LOC101260762 LOC102583669 LOC142167866 LOC107832293
Function* COP1-interacting protein 8 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8-like E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8-like E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8 E3 ubiquitin-protein ligase CIP8-like E3 ubiquitin-protein ligase CIP8-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
vvi03250 Viral life cycle - HIV-1 2
vvi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04120 Ubiquitin mediated proteolysis 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta01200 Carbon metabolism 4
nta04075 Plant hormone signal transduction 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00260 Glycine, serine and threonine metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836616 103837560 125593352 102608994 100802200 100780991 100250690 25485660 101260762 102583669 142167866 107832293
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