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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100782890   protein decapping 5 
 gma-r.7   100782890   protein decapping 5 
 gma-u.5   547474   decapping 5-like 
 gma-u.5   100806432   protein decapping 5 
 gma-u.5   100808030   protein decapping 5 
 mtr-u.5   11409116   protein decapping 5 
 ppo-u.5   7485951   protein decapping 5 
 ppo-u.5   18107407   protein decapping 5 
 ath-u.5   DCP5   decapping 5 
 bra-r.6   103835472   protein decapping 5 
 bra-r.6   103829165   protein decapping 5 
 vvi-u.5   100244212   protein decapping 5 
 vvi-u.5   100242198   protein decapping 5 
 ghi-r.1   121204904   protein decapping 5 
 ghi-r.1   107946459   protein decapping 5 
 ghi-r.1   107934795   protein decapping 5 
 bna-r.1   106415211   protein decapping 5 
 bna-r.1   106394310   protein decapping 5 
 bna-r.1   106361854   protein decapping 5 
 cit-r.1   102625181   protein decapping 5 
 cit-r.1   102624993   decapping 5-like protein 
 sly-u.5   101268571   protein decapping 5 
 sot-r.1   102579708   protein decapping 5 
 nta-r.1   107773273   protein decapping 5 
 nta-r.1   107762738   protein decapping 5-like 
 osa-u.5   4326141   protein decapping 5 
 osa-u.5   4341099   protein decapping 5 
 zma-u.5   103630653   vegetative cell wall protein gp1 
 zma-u.5   100192851   uncharacterized LOC100192851 
 zma-u.5   100191766   uncharacterized LOC100191766 
 tae-r.2   123068182   protein decapping 5 
 tae-r.2   123068227   protein decapping 5 
 tae-r.2   123076733   protein decapping 5 
 hvu-r.1   123442363   protein decapping 5-like 
 hvu-r.1   123412881   protein decapping 5-like 
 sbi-r.1   8070453   protein decapping 5 
 sbi-r.1   8072925   protein decapping 5 
 cre-r.1   CHLRE_08g378000v5   uncharacterized protein 

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Top 50 coexpressed genes to 100782890 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100782890 (gma-u.5 coexpression data)

CoexMap"100782890"


gmaLOC100782890 | Entrez gene ID : 100782890      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi cre bdi
Paralog 5 1 2 1 2 2 3 3 2 1 1 2 2 3 3 2 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034063 [list] [network] stress granule assembly  (17 genes)  IEA  
GO:0033962 [list] [network] P-body assembly  (22 genes)  IEA  
GO CC
GO:0000932 [list] [network] P-body  (67 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (563 genes)  IEA  
Protein XP_003516862.1 [sequence] [blastp]
XP_006573278.1 [sequence] [blastp]
XP_014629730.1 [sequence] [blastp]
XP_040873674.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  cysk 1,  golg 1,  chlo_mito 1  (predict for XP_003516862.1)
nucl 7,  chlo 1,  cysk 1,  golg 1,  chlo_mito 1  (predict for XP_006573278.1)
nucl 6,  chlo 2,  cysk 1,  golg 1  (predict for XP_014629730.1)
nucl 6,  chlo 2,  cysk 1,  golg 1  (predict for XP_040873674.1)
Subcellular
localization
TargetP
other 4,  chlo 4  (predict for XP_003516862.1)
other 4,  chlo 4  (predict for XP_006573278.1)
other 4,  chlo 4  (predict for XP_014629730.1)
other 4,  chlo 4  (predict for XP_040873674.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100782890
gma-r.7
for
100782890
gma-u.5
for
547474
gma-u.5
for
100806432
gma-u.5
for
100808030
mtr-u.5
for
11409116
ppo-u.5
for
7485951
ppo-u.5
for
18107407
ath-u.5
for
DCP5
bra-r.6
for
103835472
bra-r.6
for
103829165
vvi-u.5
for
100244212
vvi-u.5
for
100242198
ghi-r.1
for
121204904
ghi-r.1
for
107946459
ghi-r.1
for
107934795
bna-r.1
for
106415211
bna-r.1
for
106394310
bna-r.1
for
106361854
cit-r.1
for
102625181
cit-r.1
for
102624993
sly-u.5
for
101268571
sot-r.1
for
102579708
nta-r.1
for
107773273
nta-r.1
for
107762738
osa-u.5
for
4326141
osa-u.5
for
4341099
zma-u.5
for
103630653
zma-u.5
for
100192851
zma-u.5
for
100191766
tae-r.2
for
123068182
tae-r.2
for
123068227
tae-r.2
for
123076733
hvu-r.1
for
123442363
hvu-r.1
for
123412881
sbi-r.1
for
8070453
sbi-r.1
for
8072925
cre-r.1
for
CHLRE_08g378000v5


Ortholog ID: 4003
Species gma gma gma mtr ppo ppo ppo ath bra bra vvi vvi ghi ghi ghi bna bna bna cit cit sly sot nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi cre
Symbol LOC100782890 LOC100806432 LOC100808030 LOC11409116 LOC18107407 LOC7489377 LOC7494549 DCP5 LOC103835472 LOC103829165 LOC100244212 LOC100242198 LOC107934795 LOC107916823 LOC107887148 LOC106415211 LOC106394310 LOC106361917 LOC102625181 LOC102624993 LOC101268571 LOC102579708 LOC107773273 LOC107762738 LOC4326141 LOC4341099 LOC103630653 LOC100191766 LOC100272404 LOC123068182 LOC123068227 LOC123059763 LOC123442363 LOC123412881 LOC8070453 LOC8072925 CHLRE_08g378000v5
Function* protein decapping 5 protein decapping 5 protein decapping 5 protein decapping 5 protein decapping 5 protein decapping 5 protein decapping 5 decapping 5 protein decapping 5 protein decapping 5 protein decapping 5 protein decapping 5 protein decapping 5 protein decapping 5 protein decapping 5 protein decapping 5 protein decapping 5 protein decapping 5 protein decapping 5 decapping 5-like protein protein decapping 5 protein decapping 5 protein decapping 5 protein decapping 5-like protein decapping 5 protein decapping 5 vegetative cell wall protein gp1 uncharacterized LOC100191766 Protein decapping 5 protein decapping 5 protein decapping 5 protein decapping 5 protein decapping 5-like protein decapping 5-like protein decapping 5 protein decapping 5 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 5
mtr03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 3
bra03083 Polycomb repressive complex 3
bra03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 6
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna04136 Autophagy - other 4
bna04382 Cornified envelope formation 4
bna03040 Spliceosome 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100782890 100806432 100808030 11409116 18107407 7489377 7494549 839152 103835472 103829165 100244212 100242198 107934795 107916823 107887148 106415211 106394310 106361917 102625181 102624993 101268571 102579708 107773273 107762738 4326141 4341099 103630653 100191766 100272404 123068182 123068227 123059763 123442363 123412881 8070453 8072925 5719912
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