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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100784090   PSI type III chlorophyll a/b-binding protein 
 gma-r.7   100784090   PSI type III chlorophyll a/b-binding protein 
 gma-m.5   100784090   PSI type III chlorophyll a/b-binding protein 
 gma-u.5   100808379   chlorophyll a-b binding protein 3, chloroplastic-like 
 mtr-u.5   25494983   chlorophyll a-b binding protein 3, chloroplastic 
 ppo-u.5   7469352   photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic 
 ath-u.5   LHCA3   PSI type III chlorophyll a/b-binding protein 
 vvi-u.5   100232927   photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic 
 sly-u.5   101265617   chlorophyll a-b binding protein 8, chloroplastic-like 
 sly-u.5   CAB-8   type III chlorophyll a/b-binding protein 
 osa-u.5   4328623   chlorophyll a-b binding protein 8, chloroplastic 
 zma-u.5   100282214   chlorophyll a-b binding protein 8 

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Top 50 coexpressed genes to 100784090 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100784090 (gma-u.5 coexpression data)

CoexMap"100784090"


gmaLOC100784090 | Entrez gene ID : 100784090      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00196 [list] [network] Photosynthesis - antenna proteins (33 genes)
GO BP
GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I  (34 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (218 genes)  IEA  
GO CC
GO:0010287 [list] [network] plastoglobule  (21 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (205 genes)  IEA  
GO MF
Protein NP_001347182.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 1,  nucl 1,  mito 1,  vacu 1  (predict for NP_001347182.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001347182.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100784090

.
gma-r.7
for
100784090

.
gma-m.5
for
100784090

.
gma-u.5
for
100808379

.
mtr-u.5
for
25494983

.
ppo-u.5
for
7469352

.
ath-u.5
for
LHCA3

.
vvi-u.5
for
100232927

.
sly-u.5
for
101265617

.
sly-u.5
for
CAB-8

.
osa-u.5
for
4328623

.
zma-u.5
for
100282214

.


Ortholog ID: 6430
Species ath gma gma sly sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol LHCA3 LOC100808379 LOC100784090 LOC101265617 CAB-8 LOC4328623 LOC100282214 LOC103830657 LOC103838443 LOC100232927 LOC7469352 LOC25494983 LOC123144198 LOC123132593 LOC123401080 LOC107912485 LOC107923442 LOC106376768 LOC106421061 CHLRE_11g467573v5 LOC110430685 LOC102589781 LOC102601093 LOC102613923 LOC100835853 LOC107813664 LOC107817323
Function* PSI type III chlorophyll a/b-binding protein chlorophyll a-b binding protein 3, chloroplastic-like PSI type III chlorophyll a/b-binding protein chlorophyll a-b binding protein 8, chloroplastic-like type III chlorophyll a/b-binding protein chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 8 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic chlorophyll a-b binding protein 3, chloroplastic chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 8, chloroplastic photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic-like photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic uncharacterized protein chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 8, chloroplastic-like chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 8, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 10
ath00196 Photosynthesis - antenna proteins 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 8
gma00196 Photosynthesis - antenna proteins 7
gma00860 Porphyrin metabolism 3
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 7
gma00196 Photosynthesis - antenna proteins 4
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 8
sly00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 12
osa00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 8
zma00195 Photosynthesis 6
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 10
bra00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 9
bra00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 12
vvi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 10
ppo00860 Porphyrin metabolism 3
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 7
mtr00196 Photosynthesis - antenna proteins 7
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 9
tae00860 Porphyrin metabolism 6
tae00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 13
tae00860 Porphyrin metabolism 3
tae00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 10
hvu00195 Photosynthesis 5
hvu00710 Carbon fixation by Calvin cycle 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 10
ghi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 10
ghi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 10
cre00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 13
sbi00195 Photosynthesis 4
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 11
sot00860 Porphyrin metabolism 5
sot00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 11
cit00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00196 Photosynthesis - antenna proteins 12
bdi00860 Porphyrin metabolism 3
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 19
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 19
nta00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842446 100808379 100784090 101265617 101253628 4328623 100282214 103830657 103838443 100232927 7469352 25494983 123144198 123132593 123401080 107912485 107923442 106376768 106421061 5726919 110430685 102589781 102601093 102613923 100835853 107813664 107817323
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