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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106430356   photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic-like 
 ath-u.5   LHCA3   PSI type III chlorophyll a/b-binding protein 
 gma-u.5   100808379   chlorophyll a-b binding protein 3, chloroplastic-like 
 gma-u.5   100784090   PSI type III chlorophyll a/b-binding protein 
 vvi-u.5   100232927   photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic 
 ppo-u.5   7469352   photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic 
 mtr-u.5   25494983   chlorophyll a-b binding protein 3, chloroplastic 
 sly-u.5   101265617   chlorophyll a-b binding protein 8, chloroplastic-like 
 sly-u.5   CAB-8   type III chlorophyll a/b-binding protein 
 osa-u.5   4328623   chlorophyll a-b binding protein 8, chloroplastic 
 zma-u.5   100282214   chlorophyll a-b binding protein 8 

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Top 50 coexpressed genes to 106430356 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106430356 (bna-r.1 coexpression data)

CoexMap"106430356"


bnaLOC106430356 | Entrez gene ID : 106430356    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 1 2 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00196 [list] [network] Photosynthesis - antenna proteins (65 genes)
GO BP
GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I  (68 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (379 genes)  IEA  
GO CC
GO:0010287 [list] [network] plastoglobule  (48 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (359 genes)  IEA  
GO MF
Protein XP_013726594.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_013726594.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_013726594.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106430356
ath-u.5
for
LHCA3
gma-u.5
for
100808379
gma-u.5
for
100784090
vvi-u.5
for
100232927
ppo-u.5
for
7469352
mtr-u.5
for
25494983
sly-u.5
for
101265617
sly-u.5
for
CAB-8
osa-u.5
for
4328623
zma-u.5
for
100282214


Ortholog ID: 6430
Species bna bna bra bra ath ghi ghi cit gma gma vvi ppo mtr sly sly sot sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC106376768 LOC106421061 LOC103830657 LOC103838443 LHCA3 LOC107912485 LOC107923442 LOC102613923 LOC100808379 LOC100784090 LOC100232927 LOC7469352 LOC25494983 LOC101265617 CAB-8 LOC102589781 LOC102601093 LOC107813664 LOC107817323 LOC4328623 LOC100282214 LOC123144198 LOC123132593 LOC123401080 LOC110430685 LOC100835853 CHLRE_11g467573v5
Function* photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic-like photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic PSI type III chlorophyll a/b-binding protein photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 3, chloroplastic-like PSI type III chlorophyll a/b-binding protein photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic chlorophyll a-b binding protein 3, chloroplastic chlorophyll a-b binding protein 8, chloroplastic-like type III chlorophyll a/b-binding protein chlorophyll a-b binding protein 8, chloroplastic-like chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 8, chloroplastic-like chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 8 chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 8, chloroplastic chlorophyll a-b binding protein 8, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 10
bra00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 9
bra00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 10
ath00196 Photosynthesis - antenna proteins 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 10
ghi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 10
ghi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 11
cit00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 8
gma00196 Photosynthesis - antenna proteins 7
gma00860 Porphyrin metabolism 3
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 7
gma00196 Photosynthesis - antenna proteins 4
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 12
vvi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 10
ppo00860 Porphyrin metabolism 3
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 7
mtr00196 Photosynthesis - antenna proteins 7
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 8
sly00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 11
sot00860 Porphyrin metabolism 5
sot00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 19
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 19
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 12
osa00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 8
zma00195 Photosynthesis 6
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 9
tae00860 Porphyrin metabolism 6
tae00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 13
tae00860 Porphyrin metabolism 3
tae00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 10
hvu00195 Photosynthesis 5
hvu00710 Carbon fixation by Calvin cycle 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 13
sbi00195 Photosynthesis 4
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00196 Photosynthesis - antenna proteins 12
bdi00860 Porphyrin metabolism 3
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 10
cre00195 Photosynthesis 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106376768 106421061 103830657 103838443 842446 107912485 107923442 102613923 100808379 100784090 100232927 7469352 25494983 101265617 101253628 102589781 102601093 107813664 107817323 4328623 100282214 123144198 123132593 123401080 110430685 100835853 5726919
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