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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100787792   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 gma-r.7   100787792   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 gma-m.5   100787792   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 gma-u.5   100804053   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 mtr-u.5   11428551   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 ath-u.5   AT1G22960   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100254230   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 sly-u.5   101266332   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 osa-u.5   4351524   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 zma-u.5   103654346   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 zma-u.5   103651688   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 zma-u.5   103649522   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 

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Top 50 coexpressed genes to 100787792 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100787792 (gma-u.5 coexpression data)

CoexMap"100787792"


gmaLOC100787792 | Entrez gene ID : 100787792    
Species gma mtr ath vvi sly osa zma sot hvu tae cit sbi ppo ghi cre bna nta bdi bra
Paralog 4 1 1 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003543970.1 [sequence] [blastp]
XP_006593795.1 [sequence] [blastp]
XP_006593798.1 [sequence] [blastp]
XP_006593799.1 [sequence] [blastp]
XP_014620714.1 [sequence] [blastp]
XP_014620715.1 [sequence] [blastp]
XP_014620724.1 [sequence] [blastp]
XP_014620728.1 [sequence] [blastp]
XP_025980949.1 [sequence] [blastp]
XP_040864523.1 [sequence] [blastp]
XP_040864524.1 [sequence] [blastp]
XP_040864525.1 [sequence] [blastp]
XP_040864527.1 [sequence] [blastp]
XP_040864528.1 [sequence] [blastp]
XP_040864529.1 [sequence] [blastp]
XP_040864530.1 [sequence] [blastp]
XP_040864531.1 [sequence] [blastp]
XP_040864533.1 [sequence] [blastp]
XP_040864534.1 [sequence] [blastp]
XP_040864535.1 [sequence] [blastp]
XP_040864536.1 [sequence] [blastp]
XP_040864537.1 [sequence] [blastp]
XP_040864538.1 [sequence] [blastp]
XP_040864539.1 [sequence] [blastp]
XP_040864540.1 [sequence] [blastp]
XP_040864541.1 [sequence] [blastp]
XP_040864542.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_003543970.1)
chlo 9,  chlo_mito 5  (predict for XP_006593795.1)
chlo 9,  chlo_mito 5  (predict for XP_006593798.1)
chlo 9,  chlo_mito 5  (predict for XP_006593799.1)
chlo 9,  chlo_mito 5  (predict for XP_014620714.1)
chlo 9,  chlo_mito 5  (predict for XP_014620715.1)
chlo 9,  chlo_mito 5  (predict for XP_014620724.1)
chlo 9,  chlo_mito 5  (predict for XP_014620728.1)
chlo 9,  chlo_mito 5  (predict for XP_025980949.1)
chlo 9,  chlo_mito 5  (predict for XP_040864523.1)
chlo 9,  chlo_mito 5  (predict for XP_040864524.1)
chlo 9,  chlo_mito 5  (predict for XP_040864525.1)
chlo 9,  chlo_mito 5  (predict for XP_040864527.1)
chlo 9,  chlo_mito 5  (predict for XP_040864528.1)
chlo 9,  chlo_mito 5  (predict for XP_040864529.1)
chlo 9,  chlo_mito 5  (predict for XP_040864530.1)
chlo 9,  chlo_mito 5  (predict for XP_040864531.1)
chlo 9,  chlo_mito 5  (predict for XP_040864533.1)
chlo 9,  chlo_mito 5  (predict for XP_040864534.1)
chlo 9,  chlo_mito 5  (predict for XP_040864535.1)
chlo 9,  chlo_mito 5  (predict for XP_040864536.1)
chlo 9,  chlo_mito 5  (predict for XP_040864537.1)
chlo 9,  chlo_mito 5  (predict for XP_040864538.1)
chlo 9,  chlo_mito 5  (predict for XP_040864539.1)
chlo 9,  chlo_mito 5  (predict for XP_040864540.1)
chlo 9,  chlo_mito 5  (predict for XP_040864541.1)
chlo 9,  chlo_mito 5  (predict for XP_040864542.1)
Subcellular
localization
TargetP
chlo 1  (predict for XP_003543970.1)
chlo 1  (predict for XP_006593795.1)
chlo 1  (predict for XP_006593798.1)
chlo 1  (predict for XP_006593799.1)
chlo 1  (predict for XP_014620714.1)
chlo 1  (predict for XP_014620715.1)
chlo 1  (predict for XP_014620724.1)
chlo 1  (predict for XP_014620728.1)
chlo 1  (predict for XP_025980949.1)
chlo 1  (predict for XP_040864523.1)
chlo 1  (predict for XP_040864524.1)
chlo 1  (predict for XP_040864525.1)
chlo 1  (predict for XP_040864527.1)
chlo 1  (predict for XP_040864528.1)
chlo 1  (predict for XP_040864529.1)
chlo 1  (predict for XP_040864530.1)
chlo 1  (predict for XP_040864531.1)
chlo 1  (predict for XP_040864533.1)
chlo 1  (predict for XP_040864534.1)
chlo 1  (predict for XP_040864535.1)
chlo 1  (predict for XP_040864536.1)
chlo 1  (predict for XP_040864537.1)
chlo 1  (predict for XP_040864538.1)
chlo 1  (predict for XP_040864539.1)
chlo 1  (predict for XP_040864540.1)
chlo 1  (predict for XP_040864541.1)
chlo 1  (predict for XP_040864542.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100787792

.
gma-r.7
for
100787792

.
gma-m.5
for
100787792

.
gma-u.5
for
100804053

.
mtr-u.5
for
11428551

.
ath-u.5
for
AT1G22960

.
vvi-u.5
for
100254230

.
sly-u.5
for
101266332

.
osa-u.5
for
4351524

.
zma-u.5
for
103654346

.
zma-u.5
for
103651688

.
zma-u.5
for
103649522

.


Ortholog ID: 8706
Species ath gma gma sly osa zma zma bra vvi mtr tae tae ghi ghi bna bna sbi sbi sot cit bdi nta nta
Symbol AT1G22960 LOC100787792 LOC100804053 LOC101266332 LOC4351524 LOC103651688 LOC103640761 LOC103840808 LOC100254230 LOC11428551 LOC123102997 LOC123120199 LOC107886716 LOC107909545 LOC106429814 LOC106416285 LOC8066970 LOC8070636 LOC102596854 LOC102618961 LOC100843609 LOC107820854 LOC107768414
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial uncharacterized LOC107820854 uncharacterized LOC107768414
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838903 100787792 100804053 101266332 4351524 103651688 103640761 103840808 100254230 11428551 123102997 123120199 107886716 107909545 106429814 106416285 8066970 8070636 102596854 102618961 100843609 107820854 107768414
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