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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100254230   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 vvi-r.5   100254230   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 ath-u.5   AT1G22960   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100787792   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 gma-u.5   100804053   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 bra-r.6   103840808   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 mtr-u.5   11428551   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 ghi-r.1   107886716   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 ghi-r.1   107909545   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 bna-r.1   106416285   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 bna-r.1   106429814   pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like 
 bna-r.1   125607386   pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like 
 cit-r.1   102618961   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 sly-u.5   101266332   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 sot-r.1   102596854   pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like 
 nta-r.1   107820854   uncharacterized LOC107820854 
 nta-r.1   107768414   uncharacterized LOC107768414 
 osa-u.5   4351524   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 zma-u.5   103654346   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 zma-u.5   103651688   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 zma-u.5   103649522   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 tae-r.2   123120199   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 tae-r.2   123102997   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 tae-r.2   123111147   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 sbi-r.1   8066970   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 sbi-r.1   8070636   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 
 bdi-r.1   100843609   pentatricopeptide repeat-containing protein At1g22960, mitochondrial 

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Top 50 coexpressed genes to 100254230 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100254230 (vvi-u.5 coexpression data)

CoexMap"100254230"


vviLOC100254230 | Entrez gene ID : 100254230      
Species vvi ath gma bra mtr ghi bna cit sly sot nta osa zma tae sbi bdi cre ppo hvu
Paralog 2 1 2 1 1 2 3 1 1 1 2 1 3 3 2 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_019074648.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 2,  cyto_mito 1  (predict for XP_019074648.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_019074648.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100254230
vvi-r.5
for
100254230
ath-u.5
for
AT1G22960
gma-u.5
for
100787792
gma-u.5
for
100804053
bra-r.6
for
103840808
mtr-u.5
for
11428551
ghi-r.1
for
107886716
ghi-r.1
for
107909545
bna-r.1
for
106416285
bna-r.1
for
106429814
bna-r.1
for
125607386
cit-r.1
for
102618961
sly-u.5
for
101266332
sot-r.1
for
102596854
nta-r.1
for
107820854
nta-r.1
for
107768414
osa-u.5
for
4351524
zma-u.5
for
103654346
zma-u.5
for
103651688
zma-u.5
for
103649522
tae-r.2
for
123120199
tae-r.2
for
123102997
tae-r.2
for
123111147
sbi-r.1
for
8066970
sbi-r.1
for
8070636
bdi-r.1
for
100843609


Ortholog ID: 8706
Species vvi ath gma gma bra mtr ghi ghi bna bna bna cit sly sot nta nta osa zma zma zma tae tae tae sbi sbi bdi
Symbol LOC100254230 AT1G22960 LOC100787792 LOC100804053 LOC103840808 LOC11428551 LOC107886716 LOC107909545 LOC106416285 LOC106429814 LOC125607386 LOC102618961 LOC101266332 LOC102596854 LOC107820854 LOC107768414 LOC4351524 LOC103654346 LOC103651688 LOC103640761 LOC123120199 LOC123102997 LOC123111147 LOC8066970 LOC8070636 LOC100843609
Function* pentatricopeptide repeat-containing protein At1g22960, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial-like uncharacterized LOC107820854 uncharacterized LOC107768414 pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial pentatricopeptide repeat-containing protein At1g22960, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100254230 838903 100787792 100804053 103840808 11428551 107886716 107909545 106416285 106429814 125607386 102618961 101266332 102596854 107820854 107768414 4351524 103654346 103651688 103640761 123120199 123102997 123111147 8066970 8070636 100843609
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