Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100792121   transcription factor PIF1 
 gma-r.7   100792121   transcription factor PIF1 
 gma-u.5   100797225   transcription factor PIF1 
 gma-u.5   100788491   transcription factor PIF1 
 mtr-u.5   25484155   transcription factor PIF1 
 mtr-u.5   11419484   transcription factor PIF1 
 ppo-u.5   7459525   transcription factor PIF1 
 ath-u.5   PIL5   phytochrome interacting factor 3-like 5 
 vvi-u.5   100264869   transcription factor PIF1 
 sly-u.5   101264668   transcription factor PIF1 
 sly-u.5   101260141   transcription factor PIF1 

close


Top 50 coexpressed genes to 100792121 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100792121 (gma-u.5 coexpression data)

CoexMap"100792121"


gmaLOC100792121 | Entrez gene ID : 100792121      
Species gma mtr ppo ath vvi sly sot hvu tae cit sbi zma ghi cre bna nta bdi bra osa
Paralog 4 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04075 [list] [network] Plant hormone signal transduction (888 genes)
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (3122 genes)  IEA  
GO CC
GO MF
GO:0046983 [list] [network] protein dimerization activity  (899 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (2313 genes)  IEA  
Protein XP_003536955.1 [sequence] [blastp]
XP_006588716.1 [sequence] [blastp]
XP_040862251.1 [sequence] [blastp]
XP_040862252.1 [sequence] [blastp]
XP_040862253.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_003536955.1)
nucl 10  (predict for XP_006588716.1)
nucl 10  (predict for XP_040862251.1)
nucl 10  (predict for XP_040862252.1)
nucl 10  (predict for XP_040862253.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003536955.1)
other 8  (predict for XP_006588716.1)
other 8  (predict for XP_040862251.1)
other 8  (predict for XP_040862252.1)
other 8  (predict for XP_040862253.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100792121

.
gma-r.7
for
100792121

.
gma-u.5
for
100797225

.
gma-u.5
for
100788491

.
mtr-u.5
for
25484155

.
mtr-u.5
for
11419484

.
ppo-u.5
for
7459525

.
ath-u.5
for
PIL5

.
vvi-u.5
for
100264869

.
sly-u.5
for
101264668

.
sly-u.5
for
101260141

.


Ortholog ID: 8878
Species ath gma gma sly sly bra vvi ppo mtr mtr ghi ghi bna sot sot cit nta nta
Symbol PIL5 LOC100788491 LOC100797225 LOC101264668 LOC101260141 LOC117126501 LOC100264869 LOC7459525 LOC11419484 LOC25484155 LOC107924576 LOC107925868 LOC106357954 LOC102585610 LOC102583507 LOC102621687 LOC107808530 LOC107828013
Function* phytochrome interacting factor 3-like 5 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1-like transcription factor PIF1-like transcription factor PIF1 transcription factor PIF1-like transcription factor PIF1
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 9
sot04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 5
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816538 100788491 100797225 101264668 101260141 117126501 100264869 7459525 11419484 25484155 107924576 107925868 106357954 102585610 102583507 102621687 107808530 107828013
The preparation time of this page was 0.2 [sec].